Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03338 ATGGGGTTCATCTCTATATTCTGCCCCTGCATGGAGACTCGTCTCAGGGGATCCGCCGCACCCTCCCACGATCCCGGCGACGGAGACGCTGCAGACACCTTCGATCTCTTCTTCGGCCTCCACACACTTCAGCTCGCCACGAATTTCTTCTCTGAGCTCAACCAGCTTGGTCATGGAGGCTTTGGCCCTGTTTACAAGGGGTTGATGCCTAATGGCCAAGTAGTAGCTGTTAAGAAGCTTTCATTAGAATCAAGACAAGGTGTCAAAGAATTTACCAACGAAGTCAAGCTGTTACTAAAAATTCAGCACAAAAACTTGGTTACTCTGCTTGGCTGCTGTATAGAAGGACCTGAAAAGATGCTTGTTTACGAGTATCTGCCCAACAAAAGTCTTGATCACTTTCTGTTTGATAAAACAAAGTCTTCATATCTGGACTGGACAACACGGTTTAGAATAGTTACAGGAGTGGCGAGAGGACTTCTCTACCTGCACGAGGAGGCTCCGGAAAGAATAATTCACAGAGACATTAAAGCTAGCAACATATTACTTGACGAGAGGTTAAATCCAAAAATATCAGACTTTGGTTTGGCGAGGCTCTTTCCTGGAGACGATACTCACGTGCAGACATTCAGGATTTCTGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGTGGATATCTATCCGTGAAGACAGATGTTTTCAGTTTTGGGATCTTGGTGTTGGAAATAGTTAGCGGGAGGAAAAATCACGACGTGCAATTTGGTGTAGAAAAGGCTGATCTCTTGAATTATGCATGGATACTTCATCAGGGAGGAAAAGTTATGGATTTAATTGACCAAACTCTTGGTAGATACAACCCTGATGAGGCAGCAATGTGCATTCAGCTTGGATTGTTGTGCTGTCAAGCAAGTATAGTAGATAGGCCTGACATGAATTCTGTTCATCTCATGCTCTCAAGTGATTCTTTTACATTGCCAAGGCCAGGTAGACCCGGAATCCATGGCCGTGTCGGACATTGGACCACAACCACCACCTCTGCTTTTACCAATACTAATGCTAGTAGTGGAACCAAGGCTTCAGGAGGTAGTAGGGTTTCAGGAGCTAGTAGCTATGTGGAGGATTTTTCTAGGAATTCTATCTCCACTTCTTCTTTTGATGAAGGCAGATGA 1176 0.4481 MGFISIFCPCMETRLRGSAAPSHDPGDGDAADTFDLFFGLHTLQLATNFFSELNQLGHGGFGPVYKGLMPNGQVVAVKKLSLESRQGVKEFTNEVKLLLKIQHKNLVTLLGCCIEGPEKMLVYEYLPNKSLDHFLFDKTKSSYLDWTTRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDERLNPKISDFGLARLFPGDDTHVQTFRISGTHGYMAPEYALRGYLSVKTDVFSFGILVLEIVSGRKNHDVQFGVEKADLLNYAWILHQGGKVMDLIDQTLGRYNPDEAAMCIQLGLLCCQASIVDRPDMNSVHLMLSSDSFTLPRPGRPGIHGRVGHWTTTTTSAFTNTNASSGTKASGGSRVSGASSYVEDFSRNSISTSSFDEGR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03338 391 FunFam Cysteine-rich receptor-like protein kinase 2 25 125 - -
Arst5g03338 391 SUPERFAMILY Protein kinase-like (PK-like) 36 320 IPR011009 -
Arst5g03338 391 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 354 - -
Arst5g03338 391 CDD STKc_IRAK 56 320 - -
Arst5g03338 391 MobiDBLite consensus disorder prediction 347 371 - -
Arst5g03338 391 ProSiteProfiles Protein kinase domain profile. 50 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03338 391 Gene3D Phosphorylase Kinase; domain 1 28 125 - -
Arst5g03338 391 Pfam Protein tyrosine and serine/threonine kinase 53 317 IPR001245 GO:0004672|GO:0006468
Arst5g03338 391 SMART serkin_6 50 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03338 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Arst5g03338 391 Gene3D Transferase(Phosphotransferase) domain 1 126 326 - -
Arst5g03338 391 FunFam Cysteine-rich receptor-like protein kinase 41 126 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03338 Arst-Chr5 91937424 91940593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03338 12 378 Receptor kinase-like Gene Family AT4G21410 47.978 9.89e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst5g03338 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03338 - - gmx:100790304 619.387