Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03337 ATGTACACTTTCAGGAAGAAGATCCACAAAGATAAGGATGTTGAGCCAACTGAATTCGAAGAGTCTATTGGACAGGCTTTGTTTGATCTTGAAAATACCAATACGGAGCTGAAAAGCGAACTGAAAGATTTATACATAAATTCAGCTGTTCAAGTTGATGTGTCTGGGGGTCGAAAGGCTGTTGTTATCCACGTTCCCTTCAGATTAAGGAAAGGTTTCCGGAAGATTCATGTTAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGGATGTAGTGTTGATTGCCACCCGCAGGATAGTGAGGCCGCCAAAGAAAGGATCTGCAGTTCAGCGCCCTCGCAACCGTACACTCACTGCTGTGCATGAGGCAATGCTTGAGGATATTGTATTGCCGGCTGAGATCGTTGGGAAGCGTGTTAGGTATCGTGTTGATGGGTCGACAATCATGAAGGTTTTCTTGGATCCCAAGGAACGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTGGTGTTTGATTACCCTGCACAAGAGGCTTAG 576 0.4462 MYTFRKKIHKDKDVEPTEFEESIGQALFDLENTNTELKSELKDLYINSAVQVDVSGGRKAVVIHVPFRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRNRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSTIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFDYPAQEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03337 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Arst5g03337 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Arst5g03337 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Arst5g03337 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03337 Arst-Chr5 91932748 91935104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03337 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.058 3.86e-112 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03337 K02993 - gmx:100527642 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03337 5 91932748 91935104 Arst5g03337 5 91932748 91935104 ECH