Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03324 ATGGAAGAGAATCTACCTCCTGGATTCAGATTCCACCCAACAGATGAAGAGCTTATAACATATTATCTTACAAGAAAAGTCTCTGAAAATGGATTCACTTCTAAAGCTATTGCTGTTGTTGATCTCAACAAGTCTGAGCCTTGGGACCTTCCAGGTAAGGCAAGCATGGGTGAGAAGGAATGGTACTTCTTCAGTTTAAGAGATAGAAAGTATCCAACAGGACTAAGAACAAATAGGGCAACAGAATCAGGGTATTGGAAGACCACAGGCAAAGACAAAGAGATATTTCGTGGTGGGGTTTTGGTTGGAATGAAGAAAACCCTAGTCTTTTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTTGAGAACAAGAATCCCTTTAGAACTAAGGATGAATGGGTAGTGTGCAGGGTATTCCAAAAGAGCACAGCAGCGAAAAAACCGCCGCAACAAACATCATCCTCCCAACCTGAATCCCCATGTGATGACACAACCTCTTTGGTCAATGAATTTGGTGATGTTATTGAGCTTCCAAATCTAAACACCAACATTAATAATAATAATAATTCTTCATCATCATCCTCAAGTGCTTTATTCCCTAACAACATTCTTATTTCAGGACAACACATTCATCATCACCATGACCTAACCAATAATAATAACAATAATAATGTTAACACAAACATGAACTTAGCAATGAATTGGCCACCATCAAGTGATCATAATATTAATAATGTTCCATGGCCTTCAGTAGGGTTGTTGAATCCAAGTATTTCATCAATGAATTCCTTGATTCTCAAGGCATTGCAGCTTAGGAATAATTATCAACAAAGAGAAGTTGCATCCACATTTCCACCATCATCATATATTATGCCTCATCATCAAGGACTAGTAGTTCCTCATCAACAAGTTATTGGAACCAATAATAATGATGACCTAATAACAACTTCTTCAAATCTCATCAATGCTTCTTCTTCTTCATCAAAAGTTTTGGAATGTATGCCACATCAGCAACAACAACAACAACAGGAGCAACCATTCAATTTGGACTCCCTTTGGTAA 1089 0.3783 MEENLPPGFRFHPTDEELITYYLTRKVSENGFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKNPFRTKDEWVVCRVFQKSTAAKKPPQQTSSSQPESPCDDTTSLVNEFGDVIELPNLNTNINNNNNSSSSSSSALFPNNILISGQHIHHHHDLTNNNNNNNVNTNMNLAMNWPPSSDHNINNVPWPSVGLLNPSISSMNSLILKALQLRNNYQQREVASTFPPSSYIMPHHQGLVVPHQQVIGTNNNDDLITTSSNLINASSSSSKVLECMPHQQQQQQQEQPFNLDSLW 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03324 362 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Arst5g03324 362 SUPERFAMILY NAC domain 3 150 IPR036093 GO:0003677|GO:0006355
Arst5g03324 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 232 - -
Arst5g03324 362 ProSiteProfiles NAC domain profile. 5 150 IPR003441 GO:0003677|GO:0006355
Arst5g03324 362 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Arst5g03324 362 MobiDBLite consensus disorder prediction 153 174 - -
Arst5g03324 362 FunFam NAC domain-containing protein 100-like 14 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03324 Arst-Chr5 91772968 91776371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03324 1 362 NAC Transcription Factor Family AT3G18400 54.839 6.91e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g03324 NAM 7.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03324 - - aip:107644305 637.106