Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03317 ATGCGATTAAGCTGCAATGGTTGTCGTGTCCTTCGCAAGGGTTGCAACCTTGAATGCCCCATTAAACCCTGCCTCAATTGGATCAAATCGCCCGAATCACAGTCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCTGGCCTCCTCAACCTCCTCACCGCCGGCGACCCCAAGATCCGCCCAGCTATTTTTAAATCTTTGCTATACGAAGCTTGCGGCCGGATTGTGAACCCGGTTTTCGGTTCGACCGGGTTGCTATCGACGGGGAGCTGGCACTTGTGCGAAGCAGCTGTTGAAGCCGTTCTTAGCGGCGCGCCGATTAGACAACAGGATGCTTCAGATGGCGGTGGCCAGCTGCTAAACCCGTCTGATATTCGCCACGTGGTGAAGAGGGGGAAATCTTGCAGCTCCGATCATGTCCTTAAGCCCCGGAAGAGCCAGTTCAAGAGGCGCGCTGAGAAGTCGAAGCCGGAGCCGGAGGTTGAGCTGGATCAGGGTGTAGCTGAGTTGGTGGTGGAGGCTTGCGTAGTGAATGAGTTAGATGACTCGGCGAGCCCTGACTCAGGGTCTGGGCTGAGTGAGCACGTAAGTGTTGTTGTTGGCGGCGGCGCAGAAGCTGATAGCGGCTCAATTGAGAGTGTCAATCCGGCTCGAGCCGATGACGGGGAGCTTGAGCTGGAGCTGACTTTGGGGTGTCAGTGGCTTTGA 714 0.5686 MRLSCNGCRVLRKGCNLECPIKPCLNWIKSPESQSNATLFLAKFYGRAGLLNLLTAGDPKIRPAIFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVEAVLSGAPIRQQDASDGGGQLLNPSDIRHVVKRGKSCSSDHVLKPRKSQFKRRAEKSKPEPEVELDQGVAELVVEACVVNELDDSASPDSGSGLSEHVSVVVGGGAEADSGSIESVNPARADDGELELELTLGCQWL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03317 237 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Arst5g03317 237 MobiDBLite consensus disorder prediction 135 165 - -
Arst5g03317 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 175 - -
Arst5g03317 237 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03317 Arst-Chr5 91555077 91556381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03317 1 232 AS2 family AT3G02550 46.218 3.93e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst5g03317 LOB 1.4e-21 No_clan