Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03276 ATGGCGAGTGAGGTCGTTGCTTTCTTCTTCGACGTCGTCGACGCTGTAAAGCTTCTTAAAGCTTGCAAAGGGAATGGTGAGGAGTTCATCAATGAGTTCATGAGTATTAGTAAAACATCTCATGTAAACAGTGTTGCATTGCTCGAATTCTGTCTCAAAGGTAACAAGAAAAAAGCTCTTGTCTATGAATTCGTGCTGAATGGATCGCTTGAAAAGTATATACATAACAATGATCCTGTAACCAATCCACCTTTGAGTTGGGAAAGGCTACACCGGATTGCGAAAGGGATAACTCGAGGGCTAAAATACTTGCACCGAGTTTGCAACACGAGGATTCTCCATTTCGACATAAAACCAAACAACATCCTCCTAGACAAGAACTTTAACCCTAAAATCTCAGATTTTGGGTTGGCTAAGCTGTGCTCAAAGACACACAGCATTGTCACAATGTTAGATGCTAGAGGGACAATAGGGTACATAGCTCCAGAAGTATGGAACAGACACTTTGGTGGAGCATCGCATAAATCTTATGTATATAGTTACGGAATGATGATTCTGGAAATGATGGGGGGGAAGCATAATAACATAAATGCTGAGGTAACTAGTCATTCTAGTGAGTTGTATTTTCCTCATTAG 636 0.4072 MASEVVAFFFDVVDAVKLLKACKGNGEEFINEFMSISKTSHVNSVALLEFCLKGNKKKALVYEFVLNGSLEKYIHNNDPVTNPPLSWERLHRIAKGITRGLKYLHRVCNTRILHFDIKPNNILLDKNFNPKISDFGLAKLCSKTHSIVTMLDARGTIGYIAPEVWNRHFGGASHKSYVYSYGMMILEMMGGKHNNINAEVTSHSSELYFPH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03276 211 FunFam Os07g0541700 protein 65 156 - -
Arst5g03276 211 Pfam Protein kinase domain 19 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03276 211 SMART serkin_6 10 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03276 211 Gene3D Transferase(Phosphotransferase) domain 1 10 208 - -
Arst5g03276 211 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03276 211 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 211 IPR045874 GO:0004672
Arst5g03276 211 SUPERFAMILY Protein kinase-like (PK-like) 12 195 IPR011009 -
Arst5g03276 211 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03276 Arst-Chr5 90824073 90827822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03276 15 211 Receptor kinase-like Gene Family AT5G38280 57.868 1.03e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst5g03276 Pkinase 3.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03276 - - adu:110281585 431.795