Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03269 ATGACAGAAACAAAGTCAACTAGCAAGATTTCCAAGAAACAGGATTCGAAAAAATATTCTGCTCCTAGCAATCAGCTTTCAAGGAAACAACATCGAAAGGGTGAAAACCCTACTCGATTCATTCCAACCTCCGACCCACCTTCTGATTTTGGACATTCTGACTCGTGGATCTGTAAGAATTCGGCTTGTAGAGCAGTTCTGTCTAAAGATGATACATTTTGTAGAAGATGTTCTTGCTGTATTTGCCACCTTTTCGATGATAACAAGGACCCTAGTCTTTGGTTGGTTTGCACATCCGACTCAGCCCAAGGTGATTCCTGTGGTATGTCTTGCCACATCGAGTGTGCTCTTCAGCATGAAAAAGTGGGAGTAGTTGATCATGGGCAACTGATGCAACTAGATGGCAGTTATTGTTGTGCATCCTGCGGCAAAGTTACCGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCTCGGCGTTTAGATGTGCTGTGTTACCGGATATATTTGAGCTTCAGGCTTCTGAATGGAAGTTTAAGATTTAAACAACTTCATGAAATTGTACAAGAGGCGAAGGCTAAATTAGAAACGGAAGTTGGTCCAGTTAATGGGGTTTCTTCCAAGATGGCACGCGGCATTGTCAGCAGACTCCCTATTGCCGGTGATGTACAGAAACTCTGCTCTCTTGCTATTGGGAAAGCTGATGAATGGTTGGCCACTGTTCCCAGTTCAAATCCAGAATCCGGAGAGGGCTCCCTTCCCGCGGCCTGCAAGTTTGTTTTCGAAGAGGTAACAGCTTCATCAGTCAAAATAATTTTGATTGGAATATCAAATGCGTCTTCCGAGGAAATTAAGGGTTACAAGCTCTGGTATTACAAGAGTAGGGAGGAATCACACACAAAAGATCCTGTTTGTGTCTTTCCGAAAGCTCAGAGGAGGATTTTGATATCTGATCTCCAGCCATGCACAGAATATACTTTTAGGATTATATCTTATACCGATAAGGGCGATTTAGGTCATTCTGAGGCCAAGTGTTTCACCAAGAGCATAGAGATATTGGAAAAAAGTCCGTCTTCATCGGTTGCCATCGGCCGCAAGAAGGAGAGCCTTCAAACTGGAGACAATTCTTTTGGATCCAAAACGGAGCCGAGTTCTTCAATGGTTGATTCTGGATTTAAAGTTCGAGACCTTGGAAAACTTTTGCATCTTGCCTGGGCTCAAGAACCACGAGGCCTCGATTTAAATGTTGCTTCGGTGCCTGATTTAAATGAAGAACTTACACCTCCTTTCGAGTCTTCCAGGGACGAAGATAATGGTTGCACTTTGCAGCAGGCAGTTGAGCCGGACGACGATGCAGCCTCTCATGATCTCGAAAAAAACTGTTTGGCAGGGTCGGATGGTAGTGGTGATTCCCAAATCTGGACACAAGGGCCGACCGGAGAAGTCCCGGCTGTTGACTCTCGTGTAGATGCATGCAAGAAAAGGTTAGCAAGCTCGAACGAAGAGGCGCATGATTGTGACAGCACTCTGATGAATGGATCTCCTTTGCACATAGCGGATGGTTCGTTCTCATTGGACGAGAACTTCGAATATTGTGTGAAAGTGATTCGTTGGCTAGAATGCCAGGGTCATATTAAACAGGAGTTTCGGTTGAAGTTGCTGACATGGTTCAGTTTGAGGTCGACGGAGCAAGAACGTAGGGTGGTTAACACGTTCATTCAGACTCTGATCGATGATCCGAGTAGTTTGGCCGGGCAACTCGTCGACTCATTCTCCGATATTATATCAATCAAGAGGGCAAGAAATGGGTTGTGTATCAAAGCTGTGGGATCAAATTAA 1851 0.4468 MTETKSTSKISKKQDSKKYSAPSNQLSRKQHRKGENPTRFIPTSDPPSDFGHSDSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTSDSAQGDSCGMSCHIECALQHEKVGVVDHGQLMQLDGSYCCASCGKVTGILGCWKKQLNIAKDARRLDVLCYRIYLSFRLLNGSLRFKQLHEIVQEAKAKLETEVGPVNGVSSKMARGIVSRLPIAGDVQKLCSLAIGKADEWLATVPSSNPESGEGSLPAACKFVFEEVTASSVKIILIGISNASSEEIKGYKLWYYKSREESHTKDPVCVFPKAQRRILISDLQPCTEYTFRIISYTDKGDLGHSEAKCFTKSIEILEKSPSSSVAIGRKKESLQTGDNSFGSKTEPSSSMVDSGFKVRDLGKLLHLAWAQEPRGLDLNVASVPDLNEELTPPFESSRDEDNGCTLQQAVEPDDDAASHDLEKNCLAGSDGSGDSQIWTQGPTGEVPAVDSRVDACKKRLASSNEEAHDCDSTLMNGSPLHIADGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISIKRARNGLCIKAVGSN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03269 616 MobiDBLite consensus disorder prediction 367 392 - -
Arst5g03269 616 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Arst5g03269 616 Pfam Fibronectin type III domain 264 343 IPR003961 GO:0005515
Arst5g03269 616 MobiDBLite consensus disorder prediction 1 49 - -
Arst5g03269 616 SUPERFAMILY Fibronectin type III 265 346 IPR036116 GO:0005515
Arst5g03269 616 MobiDBLite consensus disorder prediction 1 16 - -
Arst5g03269 616 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Arst5g03269 616 Gene3D Immunoglobulins 242 354 IPR013783 -
Arst5g03269 616 CDD PHD_VIN3_plant 78 142 - -
Arst5g03269 616 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 412 IPR044514 GO:0010048|GO:0040029
Arst5g03269 616 CDD FN3 262 341 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03269 Arst-Chr5 90733471 90741532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03269 55 608 PHD Gene Family AT3G24440 48.653 1.48e-179 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03269 - - gmx:100780157 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03269 5 90733471 90741532 Arst5g03269 5 90733471 90741532 ECH
Arst5g03269 5 90733471 90741532 Arst5g03269 5 90733471 90741532 PCT