Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03259 ATGAGGAAGAAAGAAGCCATAACCATTCACCATTTCCACCTCATTGCCTTGTTTCTGGGCTCACTCACACTCACCCTCTCCTCCTCCTTCGCCGCCGCAACAAGCACCACAAAGCACGAGTTCAATGGAGCACTCACGGAGGCAGAAACCATGTACATCAAGCAGAGGCAGCTTCTCTACTACAGAGACGAGTACGGAGACAGAGGAGAAGATGTTACAGTGGACCCTACCTTGGTCTTTGAGAACAACCGCATCAGAAACGCATACATAGCCTTACAAGCATGGAAGCAAGCTATTGTCTCTGATCCTCTGAATCTCACCGCTAATTGGGTAGGTCCTAAGGTGTGCGACTACACTGGAGTCTTCTGTGCACCTGCACCTGATGACAACAGGACCCGCACCGTTGCCGGCATTGACCTCAACCATGGCGACATTGCTGGTTACCTGCCTGAGGAGCTTGGCTTGCTCACAGATCTTGCTCTCTTCCACATTAACACAAACAGGTTCTGTGGCACACTTCCCCACAAGTTCGACCGTCTCAAGATCCTCTTTGAGTTAGATCTCAGCAACAACCGGTTTGCCGGTAAGTTCCCGGCGGTAGTTCTGCGATTGCCCAAGCTTAAATTTCTAGATCTGAGGTTCAACGAATTTGAAGGCACAGTGCCTTCACAGCTCTTTGATAAAGATCTGGATGCCATTTTCATAAATCATAATCGTTTCGTCTTCGATTTACCGGATAATTTCGGTAATTCGCCTGTGTCGGTAATAGTTTTGGCGAACAACAAGTTCCACGGCTGTGTGCCTTCAAGCATCGGAAACATGTCAAGGCTGAACGAGATTATTCTGATGAATAACGGATTCCGTTATTGTTTTCCGGCAGAGGTAGGGTTGTTGAAGAATCTAACTGTGTTCGATGTGAGCTTTAATCAGCTGGTGGGGCCTTTGCCAGACGCAATTGGTGGAGCGGTGAGCTTGGAGCAACTTAATGTGGCACACAACTTGCTCTCTGGTGTAATTCCGGCTAGTATTTGTTCTCTGCCAAATTTGGAGAACTTTACATATTCTTATAATTTCTTCACGGGTGAGCCACCGAGGTGTTTGGCTCTGCCGGCTTTTGATGATAGGAAGAACTGCTTGCCTGCTAGGCCACTGCAGCGCTCTGCCGCCCAATGCAGGGCCACGCCTTCAGTGAATTGCGGCTCTTTCAGGTGTAAGCCTTTTGTTCCGTCAATTCCTTCTCCGCCTCTTGCTCTTCCTCCTCCGGTATTATCGCCTCCCCCCACCACCACCTCATTCGCCACCGCCACCACATTCACCACCACCTCCACCACCTCACCACTCACCTCCGCCACCACCTCATTCACCACCACCACCCATTTACCCTTACCTCTCACCACCGCCACCACCTCCTGTCCACTCACCTCCTCCACCAGTCTATTCACCACCACCACCATCACCGCCCCCACCATGTATAGAGCCGCCACCACCTCCTCCACTATGTATAGAACCACCCCCACCACCACCTCCGCCTCCCCCTTCGCCACCACCATGCGAAGAGCATCCACCACCACAACCATCACCACACCCTGCACCTTACCATCCACCGCCATCACCATCACCGCCACCAGCACCTGTATATGAAGGGCCCTTGCCACCTGTTATCGGAGTCTCGTATGCATCACCACCACCACCACCTTATTATTGA 1705 0.515 MRKKEAITIHHFHLIALFLGSLTLTLSSSFAAATSTTKHEFNGALTEAETMYIKQRQLLYYRDEYGDRGEDVTVDPTLVFENNRIRNAYIALQAWKQAIVSDPLNLTANWVGPKVCDYTGVFCAPAPDDNRTRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINTNRFCGTLPHKFDRLKILFELDLSNNRFAGKFPAVVLRLPKLKFLDLRFNEFEGTVPSQLFDKDLDAIFINHNRFVFDLPDNFGNSPVSVIVLANNKFHGCVPSSIGNMSRLNEIILMNNGFRYCFPAEVGLLKNLTVFDVSFNQLVGPLPDAIGGAVSLEQLNVAHNLLSGVIPASICSLPNLENFTYSYNFFTGEPPRCLALPAFDDRKNCLPARPLQRSAAQCRATPSVNCGSFRCKPFVPSIPSPPLALPPPVLSPPPPPPSPPPPVYSPPPPSPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPRSPPPPSPSPPPPSPPPPSPPPPSPPPPVVYPPPPSPPPPSPPPIYCVRPPPPPPPSPPPPSPPPPPVYSPPPPVYYYNSPPPPHSPPPPHSPPPPPPHHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPVYSPPPPSPPPPCIEPPPPPPLCIEPPPPPPPPPPSPPPCEEHPPPQPSPHPAPYHPPPSPSPPPAPVYEGPLPPVIGVSYASPPPPPYY 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03259 732 FunFam Leucine-rich repeat extensin-like protein 1 89 250 - -
Arst5g03259 732 MobiDBLite consensus disorder prediction 593 622 - -
Arst5g03259 732 FunFam Leucine-rich repeat extensin-like protein 5 251 390 - -
Arst5g03259 732 MobiDBLite consensus disorder prediction 425 551 - -
Arst5g03259 732 Gene3D Ribonuclease Inhibitor 89 251 IPR032675 -
Arst5g03259 732 SUPERFAMILY L domain-like 89 370 - -
Arst5g03259 732 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 522 - -
Arst5g03259 732 Gene3D Ribonuclease Inhibitor 252 381 IPR032675 -
Arst5g03259 732 PRINTS Proline rich extensin signature 418 434 - -
Arst5g03259 732 PRINTS Proline rich extensin signature 444 456 - -
Arst5g03259 732 PRINTS Proline rich extensin signature 457 478 - -
Arst5g03259 732 MobiDBLite consensus disorder prediction 666 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03259 Arst-Chr5 90572606 90575657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03259 45 404 Leucine-rich Repeat extension Gene Families AT3G24480 74.656 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03259 - - gmx:106799218 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03259 5 90572606 90575657 Arst5g03259 5 90572606 90575657 ECH