Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03245 ATGACAGCTCTTTCCAACGGCCACGCCGCTAATAACTCTTCTCCTCTTTTCAAGATCCCACCCATCAAATTCACCAATCTCTTCATCAATGGCCACTTTGTTCATTCTCTCTCAGGAAACGAGTTTGAGACAATAGATCCGAGAACAGGAGAGGTAATAGCGAAAATCTCGGAGGGAAGAAAAGAAGACATTGATGTGGCTGTTAAAGCGGCACGTGAGGCATTTGACAACGGTCCATGGCCACGCATGTCTGGTGCGGAAAGAGCAAAAATCATGATGAAATGGGCAGATCTTATTGAAGAAAACGTAGAAGAACTAGCAGCATTAGACGCCATTGATGCTGGAAAGTTGTACCACTTAGTTAAGGTCTTGGACATCCCTGCAGTTGCAAATTGTTTACGCTACTATGCCGGTGCTGCCGATAAGATCCATGGCGAGGTGCTAAAAGGTGCTAGAGAGTTCCATGCATATACTTTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCTTGGAATTTCCCTAGCACCATGTTTGCTGCCAAGGTTAGTCCTTCCTTGGCTGCCGGTTGCACCGTCGTCCTTAAGCCGGCCGAACAAACACCTCTGTCCGCTCTGTTTTTCGCGCATTTAGCTAAACAGGCTGGAATTCCGGATGGAGTTCTTAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGCTTCACCGGTTCAACGGAAGTAGGCCGTGCCATAATGCACGCGGCGGCTAGCAGCAATCTGAAACCGGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTGATCTTGCTCTCTTGGGAATCTTGTTTAATAAGGGAGAAATTTGTGTTGCAAGTTCAAGGGTGTTTGTTCAGGAAGGGATATATGATGAGTTTGAGAAGAAGTTGGTTGAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTCAATCTCAGCAAGGCCCTCAGGTTGACAAGAACCAATTTGAGAAAATCCTTTCATATATAGAGATTGGAAAGCAAGAAGGAGCAACCCTACTAACAGGTGGTAAAAAAGTGGGCAACAAGGGCTACTACATTGAACCTACAATCTTCTCTAATGTCAAGGAAAACATGCGCATAGCACAGGATGAAATATTTGGCCCTGTCTTGGCACTGATGAAGTTCAGGTAA 1248 0.4511 MTALSNGHAANNSSPLFKIPPIKFTNLFINGHFVHSLSGNEFETIDPRTGEVIAKISEGRKEDIDVAVKAAREAFDNGPWPRMSGAERAKIMMKWADLIEENVEELAALDAIDAGKLYHLVKVLDIPAVANCLRYYAGAADKIHGEVLKGAREFHAYTLMEPIGVVGHIIPWNFPSTMFAAKVSPSLAAGCTVVLKPAEQTPLSALFFAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRAIMHAAASSNLKPVSLELGGKSPLLIFDDADVDKAADLALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPQSQQGPQVDKNQFEKILSYIEIGKQEGATLLTGGKKVGNKGYYIEPTIFSNVKENMRIAQDEIFGPVLALMKFR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03245 415 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
Arst5g03245 415 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 415 IPR016163 GO:0016620
Arst5g03245 415 SUPERFAMILY ALDH-like 18 414 IPR016161 GO:0016491
Arst5g03245 415 FunFam Aldehyde dehydrogenase3 275 415 - -
Arst5g03245 415 Pfam Aldehyde dehydrogenase family 38 414 IPR015590 GO:0016491
Arst5g03245 415 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 29 293 - -
Arst5g03245 415 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491
Arst5g03245 415 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 274 IPR016162 GO:0016491
Arst5g03245 415 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 14 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03245 Arst-Chr5 90344644 90354119 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03245 4 415 Aldehyde Dehydrogenase Gene Family AT3G24503 72.639 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03245 K12355 - gmx:100783920 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03245 5 90344644 90354119 Arst5g03243 5 90268056 90272789 PCT
Arst5g03886 5 99911010 99918919 Arst5g03245 5 90344644 90354119 PCT