Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03243 ATGGCAAATCTCAGCAATTGCAATGATGATAGCAATAATAATGGTTCTTTTCTCAAGATTCCAAAGATAAAGTTTACAAAGCTCTTCATCAATGGAGAATTCGTGGATTCAGTTTCAGGAAAAAGGTTTGAGACCGTAGATCCAAGAACAGAAGAAGTGATTACAGAAATAGCAGAGGCTACAAAAGAAGATATTGATATTGCTGTGAAGGCAGCACGTCAAGCTTTTGATTCTGGTCCATGGCCACGCATGCCTGGTGCTGAGAGAGCAAAGATTATGCTAAAATGGGCAGAGCTAATTGAAGAGAACATTGAAGAGATAGCAGCATTGGACACCATTGATGGAGGGAAGCTATATAGTTGGTGTAAGGCTGTGGATGTTCCCGAAGCATCAAATTTACTGCGTTACTATGCTGGTGCTGCTGATAAAATCCATGGAGAAGTGTTCAAAACTTCTAGGAACCTTCATTTGTATTCTCTTATGGAACCTGTTGGTGTTGTGGGACACATTATCCCTTGGAATTTTCCTACTGTCATGTTCTTCACCAAGGCTAGCCCTGCCTTAGCCGCCGGCTGCACCATGCTCCTCAAGCCGGCCGAGGATACGCCTCTCTCGGCTCTCTTTTATGCTCATCTTGCTAAGCTGGCTGGTATCCCAGATGGGGTGCTAAATGTTGTACCTGGATTTGGTTCTACTGCTGGAGCTGCAATAGCCTCACATATGGACGTGGATGCGGTCAGTTTTACTGGTTCGACGGAGACTGGCCGGAAGGTAATGATGGCGGCAACCATGAGCAATTTGAAACCAGTTTCACTTGAATTAGGTGGCAAGTCCCCAGTCTTAATCTTTGATGATGCTGATATTGACAAAGCTGTTGACCTTGCTCTCTTTGGTATCCTACATAACAAGGGAGAAATATGTGTTGCATTTTCCAGAGTTTATGTTCAAGAAGGAATTTATGATGAATTTGAGAAGAAGGTTGTGGAGAAGGCAAAAACATGGGTAGTAGGGGACCCATTTGACCCTAAAGTTCAGCAAGGACCACAGACTAGTAAGGCACAATTTGAAAAAATTCTGTCCTATATTGAGCTTGGAAAGAAAGAAGGAGCTACCCTTTTAACTGGGGGAAAAAGATTTGGAAACAAGGGCTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTAATATCACAAGATGAGATATTTGGACCTGTCATGGTGCTTTCTAAGTTCAAGAGCATTGAGGAAGGAATTGAAAAGGCAAATAGCAGCAAATATGGACTAGCGTCGGGGATTGTGACGAAGAACATGGATATTGCAAACACAGTGTCAAGGTCCATCCGAGCAGGCATTGTTTGGATCAACTGCTTCTTTGCCTTTGATGTTGATTGCCCTTTTGGAGGTTACAAGATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTCCATAAGTACCTTCAAGTTAAATCTGTTGCAACTCCTATTTATAATTCTCCTTGGCTTTGA 1521 0.4254 MANLSNCNDDSNNNGSFLKIPKIKFTKLFINGEFVDSVSGKRFETVDPRTEEVITEIAEATKEDIDIAVKAARQAFDSGPWPRMPGAERAKIMLKWAELIEENIEEIAALDTIDGGKLYSWCKAVDVPEASNLLRYYAGAADKIHGEVFKTSRNLHLYSLMEPVGVVGHIIPWNFPTVMFFTKASPALAAGCTMLLKPAEDTPLSALFYAHLAKLAGIPDGVLNVVPGFGSTAGAAIASHMDVDAVSFTGSTETGRKVMMAATMSNLKPVSLELGGKSPVLIFDDADIDKAVDLALFGILHNKGEICVAFSRVYVQEGIYDEFEKKVVEKAKTWVVGDPFDPKVQQGPQTSKAQFEKILSYIELGKKEGATLLTGGKRFGNKGYYIEPTIFSNVKEDMLISQDEIFGPVMVLSKFKSIEEGIEKANSSKYGLASGIVTKNMDIANTVSRSIRAGIVWINCFFAFDVDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYNSPWL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03243 506 SUPERFAMILY ALDH-like 20 502 IPR016161 GO:0016491
Arst5g03243 506 Pfam Aldehyde dehydrogenase family 34 496 IPR015590 GO:0016491
Arst5g03243 506 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 300 311 IPR016160 GO:0016491
Arst5g03243 506 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 272 279 IPR029510 GO:0016491
Arst5g03243 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 276 465 IPR016163 GO:0016620
Arst5g03243 506 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 30 295 - -
Arst5g03243 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 494 IPR016162 GO:0016491
Arst5g03243 506 FunFam Aldehyde dehydrogenase, putative 468 494 - -
Arst5g03243 506 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 17 497 - -
Arst5g03243 506 FunFam Aldehyde dehydrogenase3 276 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03243 Arst-Chr5 90268056 90272789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03243 13 506 Aldehyde Dehydrogenase Gene Family AT3G24503 68.687 0.0 723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03245 5 90344644 90354119 Arst5g03243 5 90268056 90272789 PCT