Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03201 GAAGCTCTAAGAGTCCTTCAGGGCTCTCAAAACGTCGTCGTCATGCACGAGTTCTTCTGGAACGACGATGATGAAGATGCTGTGATCGTGCTCGAGTTTTTCAGGACAGACCTCGCTGCCGTGATCGCGGAAGCTGCTGCTGCTGGTGGTGGCCGTGGTTTTGATGTCGGTGAGGTGAAGAGGTGGATGATGCAGGTGCTTAGTGGTGTGGATGCTTGCCATAGGAACATGATCGTCCATAGAGACTTGAAGCCTTCCAATTTCTTGGTTTCAGATCATGGAGTGCTCAAATTGGCCCATTTCGGACAGGCAAGGATAATTATGGAGCCTGGATTTGACTCTACAGAGGAGAACCCACCACCACCATATGAGCATGATTATACTTCTTCAGTTCCGGAGAGCTCATCAATTGAACATCCTTCATCATCAGAGGCTTTTCCTCATGACCAAGGGACCATAAATCATGAAGAGTATTTCAGAGTTCTAGAAGAAATGAAAACCAAGAATACCATATATGACACTGATAAGGACCCAAACATCCAAGATGGAAACACCTCTTGTCTTGCAACTTGCACAACAAGTAACACTGATGATGGCGATGATGATCTCTGGAAGGCTTCGTTGACATTTGAAGCAGCGGAGGAGGAAGAAAGGAGGAATGAACTCGACTGTTGCCTCACACCACGTGTTGGAACTCGGTGGTATAAGGCTCCTGAATTGCTCTATGGATCCACAGATTATGGTTTAGAGGTTGATCTATGGTCTTTAGGGTGTATATTTGCGGAATTGCTAACGTTGAAGCCTTTGTTTCCTGGAACATCTGATATAGATCAATTGAGTAGGATCGTTAGTGTTTTGGGAAACATTGATGGAGAATCTTGGCCTGGTTGTTCTAAGCTTCCTGATCATGCAACAATGTCGTTTGGTAATGTGGAGAGGCCTATTGGTTTTGAAGAGTGCATGAAGAATTGCGGAAAGGATCAAGTGTCTATGATAAAGAAACTTGTTTGTTATGATCCAGCTAGGAGGGCCACAACAATGGAGATGCTTCATGATAAGTTCTTTAGTGAAGAGCCTTGA 1080 0.4481 MDTHPPSEKSWTIHTRPEITAKYQILDRVGSAAYADVYRGRRLSDDVTVALKEVHDARSALREIEALRVLQGSQNVVVMHEFFWNDDDEDAVIVLEFFRTDLAAVIAEAAAAGGGRGFDVGEVKRWMMQVLSGVDACHRNMIVHRDLKPSNFLVSDHGVLKLAHFGQARIIMEPGFDSTEENPPPPYEHDYTSSVPESSSIEHPSSSEAFPHDQGTINHEEYFRVLEEMKTKNTIYDTDKDPNIQDGNTSCLATCTTSNTDDGDDDLWKASLTFEAAEEEERRNELDCCLTPRVGTRWYKAPELLYGSTDYGLEVDLWSLGCIFAELLTLKPLFPGTSDIDQLSRIVSVLGNIDGESWPGCSKLPDHATMSFGNVERPIGFEECMKNCGKDQVSMIKKLVCYDPARRATTMEMLHDKFFSEEP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03201 423 FunFam Cyclin-dependent kinase F-1 14 109 - -
Arst5g03201 423 MobiDBLite consensus disorder prediction 175 214 - -
Arst5g03201 423 ProSiteProfiles Protein kinase domain profile. 23 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03201 423 Pfam Protein kinase domain 281 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03201 423 Pfam Protein kinase domain 23 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03201 423 Gene3D Phosphorylase Kinase; domain 1 14 111 - -
Arst5g03201 423 MobiDBLite consensus disorder prediction 192 213 - -
Arst5g03201 423 Gene3D Transferase(Phosphotransferase) domain 1 112 204 - -
Arst5g03201 423 PANTHER CELL DIVISION PROTEIN KINASE 22 422 - -
Arst5g03201 423 Gene3D Transferase(Phosphotransferase) domain 1 210 423 - -
Arst5g03201 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Arst5g03201 423 SUPERFAMILY Protein kinase-like (PK-like) 9 421 IPR011009 -
Arst5g03201 423 SMART serkin_6 23 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03201 Arst-Chr5 89487071 89489121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03201 1 423 Core Cell Cycle Gene Families AT4G28980 57.077 3.80e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Arst5g03201 Pkinase 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03201 - - gmx:548056 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03201 5 89487071 89489121 Arst5g03201 5 89487071 89489121 ECH