Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03192 ATGAATAGAGGAGTTGTTCATGGGTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAATAGCATGAGGCCTCCACCTCTTCCACAAGCTCCTCCTTTCTTGTCTACAACTCCTAATTCTTCAAACTTTCTCACCCAATATTCTTCTTCTTCCTCCTCTCTTCCTTTGCCTCCTTCTTGGCATGAAAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTTGTGGGTGAAGAAGATCATCATCAAATGCTAAGTCATCATCAAGGTGCAAATAACAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGCTCAGTTAACAGCTATGTATATGGCCATGGTGGTGCAAATGAAGAACTTCAGCCATCAAAGACTGCATCTTGGTCTCCAAATTCATGTGTCACAAGCTTCAGCAGCAACATGCTTGATTTTTCAAGCAATAACAATAGTGATCATAAGACTAATATTGATGCAAGGCATCCTCCACCACCACCACCAGATCGATCATCTGAGTGTAACAGCAGTGGAAGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCTTCCACAACTACTCAATCCACTTTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCACTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCAGTGTTGTTAGAAGCTATCGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCTCTTAGTTTACCATACTTGAGCAATGGATCAGGGAACACAAGGCATCAACAACATTCTGTTCATCAGGGAGAGAAAAATTGTTTATTCCCTGAAGACCCCGGTCAGCTACTGCATGAAAACTGCTTGAAGAGGAAAGCACCTACTAGTGAACAGGATTCTAAAGAAGAGACTAAGAAGGACCTAAGGAGTAGAGGGTTGTGTTTGGTTCCGGTTTCATGCACACTTCAAGTTGGAAGTGACAACGGTGCTGATTATTGGGCTCCAGCACTTGGTGGCGGTTTTCGGTAG 1041 0.4457 MNRGVVHGSPVQQMMAAGNPNWWNINSMRPPPLPQAPPFLSTTPNSSNFLTQYSSSSSSLPLPPSWHENQELPESWSQLLMGGLVGEEDHHQMLSHHQGANNNASLVDVKQESSVNSYVYGHGGANEELQPSKTASWSPNSCVTSFSSNMLDFSSNNNSDHKTNIDARHPPPPPPDRSSECNSSGSGGAVKKARVQPSTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSVHQGEKNCLFPEDPGQLLHENCLKRKAPTSEQDSKEETKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03192 346 MobiDBLite consensus disorder prediction 153 207 - -
Arst5g03192 346 MobiDBLite consensus disorder prediction 34 56 - -
Arst5g03192 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Arst5g03192 346 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 328 - -
Arst5g03192 346 FunFam transcription factor bHLH68 isoform X1 203 256 - -
Arst5g03192 346 MobiDBLite consensus disorder prediction 40 56 - -
Arst5g03192 346 CDD bHLH_AtbHLH_like 204 253 IPR045239 -
Arst5g03192 346 Gene3D - 201 258 IPR036638 GO:0046983
Arst5g03192 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 257 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03192 Arst-Chr5 89327643 89333124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03192 1 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.915 8.05e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03192 - - gmx:100786555 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03192 5 89327643 89333124 Arst5g03192 5 89327643 89333124 ECH
Arst5g03192 5 89327643 89333124 Arst5g03192 5 89327643 89333124 PCT