Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03191 ATGAATAGAGGAGTTGTTCATGGGTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAATAGCATGAGGCCTCCACCTCTTCCACAAGCTCCTCCTTTCTTGTCTACAACTCCTAATTCTTCAAACTTTCTCACCCAATATTCTTCTTCTTCCTCCTCTCTTCCTTTGCCTCCTTCTTGGCATGAAAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTTGTGGGTGAAGAAGATCATCATCAAATGCTAAGTCATCATCAAGGTGCAAATAACAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGCTCAGTTAACAGCTATGTATATGGCCATGGTGGTGCAAATGAAGAACTTCAGCCATCAAAGACTGCATCTTGGTCTCCAAATTCATGTGTCACAAGCTTCAGCAGCAACATGCTTGATTTTTCAAGCAATAACAATAGTGATCATAAGACTAATATTGATGCAAGGCATCCTCCACCACCACCACCAGATCGATCATCTGAGTGTAACAGCAGTGGAAGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCTTCCACAACTACTCAATCCACTTTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCACTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCAGTGTTGTTAGAAGCTATCGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCTCTTAGTTTACCATACTTGAGCAATGGATCAGGGAACACAAGGCATCAACAACATTCTGGAGAGAAAAATTGTTTATTCCCTGAAGACCCCGGTCAGCTACTGCATGAAAACTGCTTGAAGAGGAAAGCACCTACTAGTGAACAGGATTCTAAAGAAGAGACTAAGAAGGACCTAAGGAGTAGAGGGTTGTGTTTGGTTCCGGTTTCATGCACACTTCAAGTTGGAAGTGACAACGGTGCTGATTATTGGGCTCCAGCACTTGGTGGCGGTTTTCGGTAG 1032 0.4457 MNRGVVHGSPVQQMMAAGNPNWWNINSMRPPPLPQAPPFLSTTPNSSNFLTQYSSSSSSLPLPPSWHENQELPESWSQLLMGGLVGEEDHHQMLSHHQGANNNASLVDVKQESSVNSYVYGHGGANEELQPSKTASWSPNSCVTSFSSNMLDFSSNNNSDHKTNIDARHPPPPPPDRSSECNSSGSGGAVKKARVQPSTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSGEKNCLFPEDPGQLLHENCLKRKAPTSEQDSKEETKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03191 343 Gene3D - 201 257 IPR036638 GO:0046983
Arst5g03191 343 MobiDBLite consensus disorder prediction 153 207 - -
Arst5g03191 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 257 IPR036638 GO:0046983
Arst5g03191 343 MobiDBLite consensus disorder prediction 34 56 - -
Arst5g03191 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Arst5g03191 343 FunFam transcription factor bHLH68 isoform X1 203 256 - -
Arst5g03191 343 MobiDBLite consensus disorder prediction 40 56 - -
Arst5g03191 343 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 325 - -
Arst5g03191 343 CDD bHLH_AtbHLH_like 204 253 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03191 Arst-Chr5 89327639 89333124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03191 1 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.892 1.41e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03191 - - gmx:100785156 447.973