Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03183 ATGGAACGCATCATCGCCTCCAAGTACAAGCTCGGCCGCAAGATCGGAAGCGGTTCCTTCGGCGAAATCTACCTAGCTACGCATGTTGATACCTTCGAGATCGTCGCCGTCAAGATCGAGAACACTAAAACGAAGCATCCTCAATTGCTTTATGAGGCCAAGCTTTACAACATTCTCCAAGGAGGAAGTGGCATTCCTAGCATAAGATGGTCTGGTGTAGATGGGGAGGATAATGTTCTTGTGATGGATTTGCTTGGGCTTAGTCTTGAGGATCCCTTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTCCAAAGGTTTTCTACATAGAGATATAAAGCCTGACAACTTCCTCATGGGACTTGGTCGGAAAGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCTACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACGGGGACTGCACGCTATGCAAGTTGCAATACACATCTTGGGATTGAGCAAAGTCGGCGGGATGATTTGGAGTCATTGGGATATGTGCTTCTCTACTTTCTCAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGACAAAATATGTGAGAAGAAAGTGTCAACCCCTATTGAGGTTCTTTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCTCTGACCTTTGATCAGCGACCTGACTATGGATTCTTGAAGCGCCTATTTCGGGAACAATTTGCTCGGGAAGGGTTTGAATTTGATTATGTGTTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTCCAGGCTCACTCATCTGTGGTCCCGGGAGCAAGCAACAGTCGTGCAACACCAATGGACTTTGACAACCATCGAGGTGATGCTACAGAGCACATTAAATCAGGCAATGCCACTGGCTCTGGTGTTAAATTTCAGTTTAAACCACCTGCTGTTAAAAATCCACTCGACAAGAATGACAAGAATATTTTTGGTGAAGCAAATATACCCTCTACTTCCCATTCTCATGCTGGTCCTTCAAAAAGGAACTCCTTGAAGCCTGCTCCGTCCTCCGATGCTGTTAACCCTGGCCATGGGCAAGGCAGTAAAGTTGGCCCTTCAAGTAGCTGGATTTCATCTCTGCATCGCATATCATCTGCCAAATGA 1269 0.446 MERIIASKYKLGRKIGSGSFGEIYLATHVDTFEIVAVKIENTKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEDNVLVMDLLGLSLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFREQFAREGFEFDYVFDWTILKYQQAQKNRVQAHSSVVPGASNSRATPMDFDNHRGDATEHIKSGNATGSGVKFQFKPPAVKNPLDKNDKNIFGEANIPSTSHSHAGPSKRNSLKPAPSSDAVNPGHGQGSKVGPSSSWISSLHRISSAK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03183 422 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Arst5g03183 422 CDD STKc_CK1_delta_epsilon 8 282 - -
Arst5g03183 422 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Arst5g03183 422 FunFam Casein kinase I isoform delta-like 1 340 - -
Arst5g03183 422 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03183 422 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03183 422 PANTHER CASEIN KINASE-RELATED 8 327 - -
Arst5g03183 422 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03183 422 MobiDBLite consensus disorder prediction 306 321 - -
Arst5g03183 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Arst5g03183 422 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Arst5g03183 422 MobiDBLite consensus disorder prediction 306 422 - -
Arst5g03183 422 MobiDBLite consensus disorder prediction 366 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03183 Arst-Chr5 89129766 89133716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03183 9 215 EF-hand Containing Proteins AT4G23650 29.577 5.36e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Arst5g03183 Pkinase 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03183 K08960 - gmx:100805890 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03183 5 89129766 89133716 Arst5g03183 5 89129766 89133716 ECH
Arst5g03183 5 89129766 89133716 Arst5g03183 5 89129766 89133716 PCT