Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03176 ATGGGCTGCATCTACTCTCGTGTTTGCATCGGCGACAACTGCGTCGGAGGTGCCGCCGCCGCCTCCAGCATCAACGGCGACGCAATCGCTCGTCCTCCGCGCGGGACCTCATCCTCCGAGCCAGACGAATCCTCCGCCGCCGCCGCCGCCTCGCCGGACGGCGACTTCCAGGTGCTGAATCAGCTCAGCTTGACGCGGGACCCGGAGGCCGGAATCCGGAGGCTCGCTAGGGTTTCGTCACAGTTCCTTCCACCGGAAGGTTGTAAAGTGGCGAAGGTTCCTGCGTTCAGCTACGAGCTTCGCTACTCGTTCTTGTCACAGAGAGGTTACTATCCTGACGCACTGGACAAGGCGAACCAGGACAGCTTCTGTATCCACACACCGTTTGGTTCGAGTCCGAATGACCATTTCTTCGGTGTCTTCGACGGCCACGGCGAGTTCGGTGCGCAGTGTTCACAGTTTGTCAAGCAGAAGCTCTGTGAGAATCTTCTTCGAAGTGCGAAATTCCAAAACGATGCCGTTGAGGCTTGTCACGGTGCTTTTCTGGCCACGAATTTGCAGCTTCACAATGATGTCTTGGATGACAGCATGAGCGGGACGACGGCGATCACGGTGCTGGTGAGAGGGAGAACTATAATTGTGGCGAATTCAGGCGATTCGAGGGCGGTGATTGGAGAGAGGAGAGGGAAGGATCTTGTGGCCGTTGATTTGTCGTTGGATCAGACTCCGTTTAGGGCTGATGAGCTGGAGAGAGTGAAGATGTGTGGTGCCAGGGTTTTGACTTTGGATCAAATTGAGGGTTTGAAGGATCCTGAAGTTCAGTGTTGGGGAAATGAAGAAGGTGATGATGATGGGGACCCACCTAGGTTGTGGGTCCCAAATGGGATGTACCCTGGGACTGCATTCACAAGGAGCATTGGGGATTCAATTGCCGAGACTATTGGTGTTGTTGCTAACCCTGAGATTGTTGTCTTTGAGCTCACCAAGGATCATCCTTTCTTCGTGCTTGCAAGTGATGGTGTCTTTGAATTCATCTCTAGCCAAACGGTAGTTGATATGGTTGCAAAGTTCAAAGATCCACGTGATGCTTGTGCTGCAATAGTAGCTGAATCTTATCGGCTTTGGCTACAGTATGAAACTCGTACGGATGATATCACAATCATCATTGTGCATATAAATGGGCTAACTGAACCTGGTGTTGGTCAGGAAAAAACATATGGCGAATCTTTACGAACTCCAGTGCCTCAAGTTGTAGAGATGACAGGTTCAGAATCTCCCTCTACCCTGGGTTGGAACTCTAGGAACCAACGGGTAAGGCATGACTTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTGGAGAATGGACAAGCTTGGGTTCCTCCATCTTCAGCGCATAGGAAGACATGGGAGGAAGAAGCACACATAGAGCGAGCACTGCATGATCATTTTCTCTTCCGAAAACTTACTGCTTCCCAATGTAATGTTCTATTGGATTCCATGGAAAGAGTTGAGGTGCAACCTGGTGATATTATAGTCAAACAGGGCAGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAAGTCTTGGCAACTCAGGAAGAAAAAGATGGGGAAGTAACCAAGGTTTTACAGCGTTACACATCGGAAAAACTATCATGCTTTGGAGAGCTTGCTCTAATGTCATTCAAGTTTACTCAAGTTCACATATTTGTTGAGGACTATAATCCATTCAGGGACATGAAGTTAACCAAAAGTATTACAATATTCTAG 1785 0.4936 MGCIYSRVCIGDNCVGGAAAASSINGDAIARPPRGTSSSEPDESSAAAAASPDGDFQVLNQLSLTRDPEAGIRRLARVSSQFLPPEGCKVAKVPAFSYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGSSPNDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRSAKFQNDAVEACHGAFLATNLQLHNDVLDDSMSGTTAITVLVRGRTIIVANSGDSRAVIGERRGKDLVAVDLSLDQTPFRADELERVKMCGARVLTLDQIEGLKDPEVQCWGNEEGDDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTKDHPFFVLASDGVFEFISSQTVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIIVHINGLTEPGVGQEKTYGESLRTPVPQVVEMTGSESPSTLGWNSRNQRVRHDLSRARLRAIENSLENGQAWVPPSSAHRKTWEEEAHIERALHDHFLFRKLTASQCNVLLDSMERVEVQPGDIIVKQGSEGDCFYVVGSGEFEVLATQEEKDGEVTKVLQRYTSEKLSCFGELALMSFKFTQVHIFVEDYNPFRDMKLTKSITIF 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03176 594 SUPERFAMILY PP2C-like 85 394 IPR036457 -
Arst5g03176 594 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 96 394 - -
Arst5g03176 594 Pfam Protein phosphatase 2C 127 371 IPR001932 -
Arst5g03176 594 ProSiteProfiles cAMP/cGMP binding motif profile. 486 565 IPR000595 -
Arst5g03176 594 SMART PP2C_4 102 390 IPR001932 -
Arst5g03176 594 ProSiteProfiles PPM-type phosphatase domain profile. 101 392 IPR001932 -
Arst5g03176 594 CDD CAP_ED 486 565 IPR000595 -
Arst5g03176 594 Gene3D Jelly Rolls 452 579 IPR014710 -
Arst5g03176 594 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 432 566 - -
Arst5g03176 594 SUPERFAMILY cAMP-binding domain-like 451 566 IPR018490 -
Arst5g03176 594 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Arst5g03176 594 PRINTS cAMP-dependent protein kinase signature 507 521 - -
Arst5g03176 594 PRINTS cAMP-dependent protein kinase signature 557 566 - -
Arst5g03176 594 PRINTS cAMP-dependent protein kinase signature 522 536 - -
Arst5g03176 594 Pfam Cyclic nucleotide-binding domain 505 566 IPR000595 -
Arst5g03176 594 CDD PP2Cc 117 392 IPR001932 -
Arst5g03176 594 MobiDBLite consensus disorder prediction 26 51 - -
Arst5g03176 594 Gene3D - 95 393 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03176 Arst-Chr5 89001496 89007367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03176 1 586 PP2C-type Phosphatase Gene Family AT2G20050 72.269 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03176 - - aip:107644412 1096.65