Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03126 ATGATTGACAGAAAAGCAGTAATTGACGGTGAAGACACAACAAAGGGAATAGTGCTAGACCAAATTAACGGGAACCTAGACTTTGAACATGTGAAATTCACATATCGTTCAAGACCAGACAACCTCGTACTCAATGACTTCAATCTGAGGGTTGAATCAGGTAAAACGGTTGCACTTGTTGGTGCAAGTGGGAGTGGAAAGTCAACGGCAATAGCGTTGGTGCAAAGGTTCTATGATGTGGATGAAGGTGTTGTGAGGGTTGATGGTGTTGACATAAAGAGGTTGCAGTTGAAGTGGTTGAGGGGTAAAATGGGGCTTGTGAGTCAAGAACATGCATTGTTTGGGACATCTATTAAGGAGAATATTATGTTTGGAAAGCTTGATGCTACCATGGATGAGGTTGTTGCTGCTGCTACTGCTGCTAATGCTCATAACTTTGTTAGGCAGCTCCCTCAGGGTTATGAAACCAAGATTGGAGAAAGGGGAGCACTTCTTTCAGGAGGACAAAAGCAGCGAATAGCAATTGCAAGAGCCATCATAAAGAATCCGGTGATTCTTCTTCTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCTGAATTACTTGTCCAAAATGCCCTTGATCATGCCTCATTGGGCAGGACTACATTGGTTGTTGCACACAAGCTATCAACTGTCCGAAATGCAGATGTCATAGCCGTTGTCAACGCCGGTTCCATCATCGAAATCGGCACGCACAACGAGCTCATAACCCATCCAAACGGCCAATATGCAAAGCTAGCAAAACTCCAAACACAACTCAGCTTTGATGATCAACAAGAAATATCCAATGCTCTTTCTTCTGCAGCAAGAAGCAGTGCTGGTAGAACCAGCACAGCAAGATCAACAAGCCCTGCAATTTTCCAAAAATCACCAATCCCTATTGATGATAACACCATAAACCCGGAATCATCTCTTGTTTCTCACCCTTCACCTTCTTTTCCAAGGCTTCTATCTCTGAATGCACCTGAATGGAAACAATGTTTAATTGGTACTTTTTCCGCAATAGCTTTCGGCTCAGTGCAGCCCATATATGCCTTAACAATTGGTGGCATGATTTCTGCATTTTTCGCCGAAAGCCATAGTGAAATGATTCACAGAATCAGGACTTACTCTTTGATTTTCACTTCTCTTTCTCTTGCTTCCATCACACTCAACCTCTTGCAGCACTACAATTTCGCATACATGGGAGCAAGATTAACAAAAAGGATACGGCAGAGAATGCTTGAGAATATCTTAACATTCGAAACGGCTTGGTTTGATGAAGAAAATAATTCCAGTGGAGCATTGTGCTCGAGGCTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTCGCGGATCGCGTTTCATTGCTGGTTCAAACAGCTTCTGCTGTCAGCATTGCAATGATCATAGGACTCGCCGTGGCGTGGAAGCTCGCTCTTGGGATGATAGCAGTGCACCCACTCACAATCCTCTGCTTCTACACAAGAAAAGTTCTTCTCTCTACACTCTCATCAAAATTCATCAAGGCACAGAATCATAGCACACAGATTGCAGTTGAAGCAGTGTACAACCACAGAATTGTGACTTCATTTGGAAGCATACAAAAGGTTTTGACATTATTCGATGAAGCGCAGGAGGCGCCAAGGAAGGAGGCGAGGAAGAAGTCGTGGCTGGCCGGGATTGGAATGGGGTCTGCTCAATGCCTAACATTCATGACATGGGCTTTGGATTTCTGGTATGGAGGGACATTGGTGGAGAAGAAGGATATTTCTGCAGGGGATGTGTTTAAGACATTCTTTGTTTTGGTTAGCACTGGGAAGGTCATTGCTGAAGCTGGAAGCATGACTTCTGATCTTGCAAAGTCCTCAACTGCTGTCAAATCTGTTTTTGAGATTCTTGACAGGAAATCACTTATTCCCAAGGCTGGTGATTGCAACAATGGAAGAAAGTTGGAAAATATGAGTGGGAAGATAGAACTAAAGAACGTTGATTTCGCCTACCCAAGTAGGGCAGGGACACCGATATTGCGCAAGTTTTGCTTGGAGGTGAAGGCAGGGAAGAGTATTGGGTTAGTTGGGAAGAGTGGTTGTGGAAAATCAACAGTGATTGCATTGATCCAAAGATTCTATGATGTTGAGAGAGGGTTTGTGAAAATGGACAATGTGGACATAAGGGAACTAGATATTCAATGGTATAGGCAGCACACTGCACTTGTTAGCCAAGAACCTGTCATATATTCTGGCACTGTAAGGGATAACATCTTGTTTGGGAAGCAAGATGCAACTGAGAATGAAGTTGTTGAGGCTGCAAAAGCCGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACAGAATGTGGAGAAAGGGGAGTGCAACTATCTGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCCATAATAAGGAACCCAACAATATTGCTGCTTGACGAAGCAACAAGTGCACTTGATGTTCAATCAGAACAAGTTGTGCAAGAAGCATTAGACAGGATCATGGTGGGAAGAACCACCATTGTTGTAGCACATAGGCTCAACACCATCAAAGAACTTGACTCGATTGCATATGTCTCAGAGGGTAAGGTTCTTGAGCAAGGAACCTATGCTCAACTTAGGCACAAGAGAGGTGCCTTCTTCAATCTTGCATGCCATCAAATCCAAAATTAG 2721 0.4359 MIDRKAVIDGEDTTKGIVLDQINGNLDFEHVKFTYRSRPDNLVLNDFNLRVESGKTVALVGASGSGKSTAIALVQRFYDVDEGVVRVDGVDIKRLQLKWLRGKMGLVSQEHALFGTSIKENIMFGKLDATMDEVVAAATAANAHNFVRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDHASLGRTTLVVAHKLSTVRNADVIAVVNAGSIIEIGTHNELITHPNGQYAKLAKLQTQLSFDDQQEISNALSSAARSSAGRTSTARSTSPAIFQKSPIPIDDNTINPESSLVSHPSPSFPRLLSLNAPEWKQCLIGTFSAIAFGSVQPIYALTIGGMISAFFAESHSEMIHRIRTYSLIFTSLSLASITLNLLQHYNFAYMGARLTKRIRQRMLENILTFETAWFDEENNSSGALCSRLSNEASMVKSLVADRVSLLVQTASAVSIAMIIGLAVAWKLALGMIAVHPLTILCFYTRKVLLSTLSSKFIKAQNHSTQIAVEAVYNHRIVTSFGSIQKVLTLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMTWALDFWYGGTLVEKKDISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVKSVFEILDRKSLIPKAGDCNNGRKLENMSGKIELKNVDFAYPSRAGTPILRKFCLEVKAGKSIGLVGKSGCGKSTVIALIQRFYDVERGFVKMDNVDIRELDIQWYRQHTALVSQEPVIYSGTVRDNILFGKQDATENEVVEAAKAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHKRGAFFNLACHQIQN 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03126 906 PANTHER ABC TRANSPORTER B FAMILY 343 899 IPR039421 -
Arst5g03126 906 PANTHER ABC TRANSPORTER B FAMILY 343 899 IPR039421 -
Arst5g03126 906 FunFam ABC transporter B family member 4 16 273 - -
Arst5g03126 906 Gene3D ABC transporter type 1, transmembrane domain 1 282 IPR036640 GO:0005524|GO:0016020
Arst5g03126 906 Gene3D - 16 265 IPR027417 -
Arst5g03126 906 Gene3D ABC transporter type 1, transmembrane domain 1 282 IPR036640 GO:0005524|GO:0016020
Arst5g03126 906 Gene3D - 16 265 IPR027417 -
Arst5g03126 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 903 IPR027417 -
Arst5g03126 906 Gene3D - 656 906 IPR027417 -
Arst5g03126 906 Pfam ABC transporter 44 193 IPR003439 GO:0005524
Arst5g03126 906 FunFam Putative ABC transporter B family member 8 307 651 - -
Arst5g03126 906 Gene3D ABC transporter type 1, transmembrane domain 308 650 IPR036640 GO:0005524|GO:0016020
Arst5g03126 906 Gene3D ABC transporter type 1, transmembrane domain 308 650 IPR036640 GO:0005524|GO:0016020
Arst5g03126 906 FunFam ABC multidrug transporter SitT 656 904 - -
Arst5g03126 906 Pfam ABC transporter 687 833 IPR003439 GO:0005524
Arst5g03126 906 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 666 902 IPR003439 GO:0005524
Arst5g03126 906 CDD ABC_MTABC3_MDL1_MDL2 27 264 - -
Arst5g03126 906 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524|GO:0016887
Arst5g03126 906 Pfam ABC transporter transmembrane region 342 612 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g03126 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 264 IPR027417 -
Arst5g03126 906 SUPERFAMILY ABC transporter transmembrane region 325 643 IPR036640 GO:0005524|GO:0016020
Arst5g03126 906 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 262 IPR003439 GO:0005524
Arst5g03126 906 ProSitePatterns ABC transporters family signature. 805 819 IPR017871 GO:0005524|GO:0016887
Arst5g03126 906 SMART AAA_5 693 885 IPR003593 GO:0016887
Arst5g03126 906 SMART AAA_5 53 279 IPR003593 GO:0016887
Arst5g03126 906 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 342 629 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g03126 906 CDD ABC_6TM_Pgp_ABCB1_D2_like 331 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03126 Arst-Chr5 88310288 88314193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03126 1 896 Calmodulin-binding Proteins AT2G36910 44.891 0.0 772