Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03112 ATGAAGGAAGTTAGACTTTCATGTTTCACTCTTGTGGCGTTGATCATCATGTTCTTGAACCATGCAAACTCTGAGTCTCAGCTTCTTCATGATCAAGAACATCAAGTCCTAATGAGGATCAAGCATTACCTTCAAGACCCTTCTTTTCTCAGTCACTGGACCCCATCAAACTCCTCTCATTGTTCTTGGCCTGAGATTTCTTGCACCAATGGTTCTGTCACAGGAATAACTTTGGTTAATCTTAACATCAATCAAACAGTGCCATCTTTCATTTGTGATCTCAAGAACCTCACACTTGTTGATTTCAGCAACAACTCAATTCCTGGGGTGTTCCCAAATTATCTCTACAATTGCTCCAAGCTTGAGTATCTTAATCTTTCTATGAACTACTATGTTGGTGAAATACCTCATGATATTGATACTTTGTCCAGTTTGAAGTACCTTAACCTTAGTTATTCCAATTTCACCGGTGACATTCCTTCCAGTGTTGGAAATTTGAAGGAACTAAGGTTCCTTGCACTGCAAGATTGTTTATTCAATGGTACTCTCCCTGACGAGATTGGAAACTTGTCTAATCTCGAAACCTTGGATTTGTCCAGTAACGAATTGCTTCCGCCTTCGAGGTTTTCGTTGAGCTGGACCAAGTTGAATAAGCTGAAAGTGTTTTACATGTTTGAGTGCAACCTGTTTGATGAAATTCCTGAGAGAATTGGAGAAATGGTTGCACTGGAGAAGCTGGATTTGTCGCAGAACAATTTAACCGGAGAAATTCCAAGCAGTTTGTTCTTGCTGAAGAATCTGAGTGTTGTGTACCTTTGGGGAAACAAACTTTCTGGGGAGATACCATCCAAGATTGAAGCATCGAATCTGACCAACATTTCATTATCAAAGAATATGCTTACAGGGAAAATACCAGAAGATTTTGGAAAACTCCAAATGCTAATGGAATTCAAATTGAACATGAATAACTTGTCAGGGGAGATACCACAAAGCATAGGGAGTCTTCCATCTCTAGTGGATTTTCGTGTCTTCATGAACAACCTATCAGGTACTCTTCCTCCCCAATTCGGCCGAAACTCCAAGCTTCAATCCTTTCAAATTTCATCCAACAATTTTATTGGAATGCTTCCAGAGAATTTATGCTATTATGGTGAATTACTTACATTAACTGTTTATGAAAATAGCTTGAATGGTGAGCTGCCAGAGTCACTAGGAAATTGTAGTACCCTTCAGAACCTGAAAATTTGGAGCAATGAATTTTCTGGTAACATTCCTAGTGGCCTTTGGAAATCTCCCAATTTGGTGAATTTCATAGCACATCATAATAGGTTCACTGGTGAAATCCCTGATGAATTGTCACCGAGCATTTCGCTCTTCGACATAAGTTACAATCAGTTTTCTGGTAGAATTCCACCTGGCGTGTCATCTTGGACTAATGTGGTAGAGTTTATTGCAAGTAAGAACTATTTGAATGGAACTATTCCTCATGAGCTAACAGAACTTCCCAAGTTAACAAAACTCTTGCTTGATCAGAACAACCTCACTGGGACAATTCCTTCAGACATAGCCTCGTGGAACTCTCTAGTTACTCTAAATTTGCGCCATAATCACTTGTATGGACAAATCCCAGATTCAATTGATCCATTACCTGCACTTCTAGAACTTGACCTCTCAGAGAATCAATTCTCTGGCCATGTTCCTTCTCTGTCTTCAAGACTCACCAATCTCAATCTATCATCCAATCATCTGACTGGGAAAGTTCCAAGTGAATTTCAGAATTCTGCATTCGACACAAGCTTTTTGGACAATCCTGGCCTTTGCGCTGATACACCGGTGCTGAACATTACATTGTGCAATTCTGGCTCACAAAATTCAAGCAAGGACTCATCATCTTGGTCCCTTGCCTTGATCATAGGCCTTGTTTTAGCAGTCTCATTACTCGCTATTGTGGTGTTATTCTTGGTTATCAGATTCATCAGGAAAAGGAAGAAAGTGGATAACTCATGGAAGCTCACTTCATTCCAAAGGCTGAGCTTCACTGAATCGGATATAGTTTCTTCAATGACAGAACATAATATCATTGGCAGTGGAGGATATGGTACAGTCTACCGTGTCAATGTCAATGGTTTCGGCTTTGTTGCTGTCAAAAAGATTTCTGGGAACAGAAAGCCAGACCGGAAGCTTGAGAATTCGTTTCTCTCTGAAGTTAAGATATTAAGCAGCATTCGACATATAAACATTGTGAAATTGCTATGCTGCATCCACAATGATGATTCTATGCTTCTTGTTTATGAGTATATGGAGCATAGAAGCCTTGACAAATGGCTGCACAAGAAGATCAAGCCATCATCACTATCTATTTCAGGTTCAGTCCAACATCATCATGTTGCACTGAATTGGCCCAAGAGAATACAAATAGCCATTGGTGTTGCACAAGGACTGAGCTACATGCACCATGATTGCTCCCCGCCCATTGTTCATCGCGATGTGAAAACGAGCAACATACTTTTGGATTATCAATTCAATGCAAAAGTTGCTGATTTTGGCCTAGCAAGGATGTTGATCAAGCCAGGGGAACTTGCCACCATGTCAACTGTTGTTGGATCATTTGGATATCTTGCTCCAGAATACATTCAGACCACAAAAGTCAGTGAAAAGATTGATGTTTTTAGCTTTGGGGTGATCCTATTGGAGCTGACAACAGGTAAAGAAGCTAACTATGGAGATGAGCACTCATCTCTTGCAGAATGGGCATGGAAACACATTCAGTTAGGAAGCAACATTGAAGAGCTACTTGATAAAGAAGTCATGGAACCTATTTACATGGATGAGATGTGTCATGTTTTCAAACTTGGGGTGATGTGCACTTCAAAGCTTCCTGATTCTAGACCTACCATGAAGGAGGCATTGCAAGTATTGCTACAAAGTGGTGAATCATATTCTTTTGGCGAGAGGAATAGTGTTGGACAGTGTGATGCTGTTCCTCTTCTTAGAAATTCAAAACGTGAGCATAAATTGGATATTGATGGTGACAAACTAGCTTGA 3045 0.4016 MKEVRLSCFTLVALIIMFLNHANSESQLLHDQEHQVLMRIKHYLQDPSFLSHWTPSNSSHCSWPEISCTNGSVTGITLVNLNINQTVPSFICDLKNLTLVDFSNNSIPGVFPNYLYNCSKLEYLNLSMNYYVGEIPHDIDTLSSLKYLNLSYSNFTGDIPSSVGNLKELRFLALQDCLFNGTLPDEIGNLSNLETLDLSSNELLPPSRFSLSWTKLNKLKVFYMFECNLFDEIPERIGEMVALEKLDLSQNNLTGEIPSSLFLLKNLSVVYLWGNKLSGEIPSKIEASNLTNISLSKNMLTGKIPEDFGKLQMLMEFKLNMNNLSGEIPQSIGSLPSLVDFRVFMNNLSGTLPPQFGRNSKLQSFQISSNNFIGMLPENLCYYGELLTLTVYENSLNGELPESLGNCSTLQNLKIWSNEFSGNIPSGLWKSPNLVNFIAHHNRFTGEIPDELSPSISLFDISYNQFSGRIPPGVSSWTNVVEFIASKNYLNGTIPHELTELPKLTKLLLDQNNLTGTIPSDIASWNSLVTLNLRHNHLYGQIPDSIDPLPALLELDLSENQFSGHVPSLSSRLTNLNLSSNHLTGKVPSEFQNSAFDTSFLDNPGLCADTPVLNITLCNSGSQNSSKDSSSWSLALIIGLVLAVSLLAIVVLFLVIRFIRKRKKVDNSWKLTSFQRLSFTESDIVSSMTEHNIIGSGGYGTVYRVNVNGFGFVAVKKISGNRKPDRKLENSFLSEVKILSSIRHINIVKLLCCIHNDDSMLLVYEYMEHRSLDKWLHKKIKPSSLSISGSVQHHHVALNWPKRIQIAIGVAQGLSYMHHDCSPPIVHRDVKTSNILLDYQFNAKVADFGLARMLIKPGELATMSTVVGSFGYLAPEYIQTTKVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWAWKHIQLGSNIEELLDKEVMEPIYMDEMCHVFKLGVMCTSKLPDSRPTMKEALQVLLQSGESYSFGERNSVGQCDAVPLLRNSKREHKLDIDGDKLA 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03112 1014 SMART LRR_typ_2 240 264 IPR003591 -
Arst5g03112 1014 SMART LRR_typ_2 94 118 IPR003591 -
Arst5g03112 1014 SMART LRR_typ_2 142 166 IPR003591 -
Arst5g03112 1014 SMART LRR_typ_2 549 573 IPR003591 -
Arst5g03112 1014 SMART LRR_typ_2 190 211 IPR003591 -
Arst5g03112 1014 SMART LRR_typ_2 501 525 IPR003591 -
Arst5g03112 1014 Gene3D Ribonuclease Inhibitor 141 207 IPR032675 -
Arst5g03112 1014 PANTHER RECEPTOR-LIKE PROTEIN 55 389 973 - -
Arst5g03112 1014 FunFam Receptor-like protein kinase HSL1 668 766 - -
Arst5g03112 1014 FunFam Leucine-rich repeat receptor-like protein kinase TDR 316 620 - -
Arst5g03112 1014 Gene3D Ribonuclease Inhibitor 31 140 IPR032675 -
Arst5g03112 1014 Gene3D Ribonuclease Inhibitor 379 475 IPR032675 -
Arst5g03112 1014 ProSiteProfiles Protein kinase domain profile. 688 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03112 1014 FunFam Receptor-like protein kinase HSL1 isoform A 30 181 - -
Arst5g03112 1014 Gene3D Phosphorylase Kinase; domain 1 658 766 - -
Arst5g03112 1014 Gene3D Transferase(Phosphotransferase) domain 1 767 988 - -
Arst5g03112 1014 Gene3D Ribonuclease Inhibitor 476 613 IPR032675 -
Arst5g03112 1014 SUPERFAMILY Protein kinase-like (PK-like) 682 973 IPR011009 -
Arst5g03112 1014 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Arst5g03112 1014 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 186 286 - -
Arst5g03112 1014 Gene3D Ribonuclease Inhibitor 208 378 IPR032675 -
Arst5g03112 1014 ProSiteProfiles Leucine-rich repeat profile. 242 264 IPR001611 GO:0005515
Arst5g03112 1014 SUPERFAMILY RNI-like 64 349 - -
Arst5g03112 1014 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Arst5g03112 1014 Pfam Leucine rich repeat 502 562 IPR001611 GO:0005515
Arst5g03112 1014 Pfam Protein kinase domain 690 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03112 1014 SUPERFAMILY RNI-like 288 591 - -
Arst5g03112 1014 FunFam Kinase family with leucine-rich repeat domain-containing protein 767 988 - -
Arst5g03112 1014 SMART serkin_6 688 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03112 1014 Pfam Leucine Rich Repeat 572 593 IPR001611 GO:0005515
Arst5g03112 1014 Pfam Leucine Rich Repeat 243 261 IPR001611 GO:0005515
Arst5g03112 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03112 Arst-Chr5 88055621 88059000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03112 33 1008 Receptor kinase-like Gene Family AT5G25930 49.294 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst5g03112 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03112 - - gmx:100798963 1363.21