Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03108 ATGGGGAGAGCCACAAGGTGGTTGAAGAACTTGTTTGGGATAAGAAGAGACAAAGAACAACAACACAAACAAGAAAACTCAAACTATGGAGACCCCAGAAGCATGAAATTCTCTTCATCTTCTTCTACTACTTCTGCTGCTCAGAGAAATTCAAGTAATTCTAGAGTTCTGTGTCATAATCCAGCTACTATTCCACCAAACATTTCTCCAGCTGAAGCAGCTTGGTTGCAATCTTTCTACAATGAGACAGAGAAGGAGCAGAACAAGCATGCCATTGCTGTTGCTGCTGCTACTGCAGCTGCAGCTGATGCTGCTGTGGCAGCAGCACAGGCTGCAGTTGCAGTGGTTAGGCTCACAAGCCATGGAAGAGGTACCATGCTTGGTGCTGGACATGAGATTTGTGCTGCCACCAAGATTCAGACAGTGTTTAGAGGCTACTTGGCAAGGAAAGCACTGAGAGCCTTAAAGGGATTGGTTAAGTTACAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACACTGCATGGAATGCAGGCACTTATCAGAGCTCAAGCCACAGTGAGGTCTCAGAAAAAATCTCAAGGATTCATGGCCGGAAAGAATGATTCATATAGGTCTCAAATCCGTGCACGAAGATCCATGGAGAGATTTGATGACACTAGGAGTGAGTACACAGCTCCAACTCATAGTAGAAGGTTATCATCTTCATTTGATGCCACAATTAACAACAATAACAGTTTTGATGGTAGCCCCAAAATTGTGGAAGTGGACACTGGTATTAGGCCTAAGTCAAGGTCCCGGAGAACCAACACATCAATGTCGGATTTTGGGGACGACCCTTCATTCCAAACAATTTCCTCTCCCCTTCCAATCCCATGTCGGACACCGGGGCGCTTGTCCATACCGGATCATTCGGATTGGGGGTTGACAGGGGAAGAGTGCAGATTCTCAACTGCACAAAGCACTCCAAGGTTTGCAACAAGCACTTGTAGTTGTGGATCAGTTGCAGCCACGACACCAAAGAGTGTGTGCAATGAGAGCTTTTTCTATGGGAATTATCCGAATTACATGGTGAGCACGCAGTCTTTCAAGGCAAAGTTGAGGTCTCATAGTGCTCCAAAGCAAAGGCCAGAGCCAGGGGGTGCAAGGAAGAGGCTTACCCTGAATGAGATGATGGAATCTAGGAACAGTTTGAGTGGGGTTAAGATGCAGAGGTCATGCTCACAGATTCAAGAAGCCATTAACTTCAAGAATGCTGTGATGGGTAGGCTTCACACTAGGGATGCAGACAGAAACCACTTCCAAAAGAGGAGGTGGTGA 1332 0.464 MGRATRWLKNLFGIRRDKEQQHKQENSNYGDPRSMKFSSSSSTTSAAQRNSSNSRVLCHNPATIPPNISPAEAAWLQSFYNETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMLGAGHEICAATKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHGMQALIRAQATVRSQKKSQGFMAGKNDSYRSQIRARRSMERFDDTRSEYTAPTHSRRLSSSFDATINNNNSFDGSPKIVEVDTGIRPKSRSRRTNTSMSDFGDDPSFQTISSPLPIPCRTPGRLSIPDHSDWGLTGEECRFSTAQSTPRFATSTCSCGSVAATTPKSVCNESFFYGNYPNYMVSTQSFKAKLRSHSAPKQRPEPGGARKRLTLNEMMESRNSLSGVKMQRSCSQIQEAINFKNAVMGRLHTRDADRNHFQKRRW 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03108 443 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Arst5g03108 443 MobiDBLite consensus disorder prediction 15 61 - -
Arst5g03108 443 Pfam Protein of unknown function (DUF4005) 326 404 IPR025064 -
Arst5g03108 443 ProSiteProfiles IQ motif profile. 156 183 IPR000048 GO:0005515
Arst5g03108 443 ProSiteProfiles IQ motif profile. 135 160 IPR000048 GO:0005515
Arst5g03108 443 Pfam IQ calmodulin-binding motif 134 153 IPR000048 GO:0005515
Arst5g03108 443 Pfam IQ calmodulin-binding motif 159 173 IPR000048 GO:0005515
Arst5g03108 443 MobiDBLite consensus disorder prediction 269 294 - -
Arst5g03108 443 SMART iq_5 131 153 IPR000048 GO:0005515
Arst5g03108 443 SMART iq_5 154 175 IPR000048 GO:0005515
Arst5g03108 443 MobiDBLite consensus disorder prediction 27 60 - -
Arst5g03108 443 Gene3D - 133 183 - -
Arst5g03108 443 MobiDBLite consensus disorder prediction 267 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03108 Arst-Chr5 87873263 87875913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03108 1 407 IQD Protein Family AT3G16490 49.522 2.27e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03108 - - zju:107432812 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03108 5 87873263 87875913 Arst5g03108 5 87873263 87875913 ECH