Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03105 ATGGCGATTTCAAATTCGCATTACATTTTGTGTGTTACAATAGCAATCCTTGTGATTGTTGTTCAAAATTCAAGAAGTGCATATTGCCGGCACCATGATGATGACACTAGAAAGGGAATTCGGTTGAGGAATGGATTATTGTCCAACATGAGTAGGATAGAGTTCTCGGAAGAACAGTTCATGAAATGGGTCAACTTTGTTGGTAACCTCAATCATTCCATGTTCAAGGCTGCAAAGAACAAGCTCTTTGCTTCCTACACTTTGCATGTTGATAACAACCCTGCACTTGGTGACTTCACTTCCATTCAAGACGCCATTGATTCTCTTCCTTCCATTAATCTTGTTAGAGTCCTCATCAAGGTTCATGCAGGTCTTTACACGGAGAAAGTGAACATTCCTCAATTGAAATGGTTCGTAACAATAGAAGGAGCAGGTGCAGATAAAACAATAGTTCAATATGGTGACACAGCACAAACACCTGGCCCAAATGGGAGGCCATTGGGAACCTACGGTTCTGCTACTTTTGCTGTTAATTCACCTTATTTTATTGCAAAGAACATCACATTCAAGAACACTACTCCAGTTCCTGCACCAGGAGCAATTGGGAAACAGGCAGTGGCATTCAGGATTTCAGCGGACACAGCAGCATTCTATGGATGCAGTTTCTTGGGTGCACAGGACACACTGTATGATCATATGGGAAGACATTATTATAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTCGGAAACGCTCTCTCTCTATTTGAGGGGTGTCACGTGCATGCAATAGCACAGAATATGGGAGCAGTAACAGCGCAGGGGAGGAGTAGCATGTTGGAGGACACGGGGTTCTCATTCGTGAACTGTAAGGTCACGGGGTCAGGGGCACTATACCTGGGAAGGGCATGGGGTCCCTTTTCTCGCGTGGTATTCGCCTATACATATATGGACAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGACCCTAATCGTGAATTGACTGTATTCTATGGACAATACAAATGCACAGGAGCGGGAGCAAGCTTTGCTGGGAGGGTATCATGGTCAAGGGAACTCACTGACGATGAAGCCAAGCCTTTTCTTTCTCTTTCCTTTGTTGATGGCACGGAATGGATCAATCTTTGA 1161 0.4401 MAISNSHYILCVTIAILVIVVQNSRSAYCRHHDDDTRKGIRLRNGLLSNMSRIEFSEEQFMKWVNFVGNLNHSMFKAAKNKLFASYTLHVDNNPALGDFTSIQDAIDSLPSINLVRVLIKVHAGLYTEKVNIPQLKWFVTIEGAGADKTIVQYGDTAQTPGPNGRPLGTYGSATFAVNSPYFIAKNITFKNTTPVPAPGAIGKQAVAFRISADTAAFYGCSFLGAQDTLYDHMGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNMGAVTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNRELTVFYGQYKCTGAGASFAGRVSWSRELTDDEAKPFLSLSFVDGTEWINL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03105 386 Gene3D - 84 386 IPR012334 -
Arst5g03105 386 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 80 385 - -
Arst5g03105 386 SUPERFAMILY Pectin lyase-like 84 385 IPR011050 -
Arst5g03105 386 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Arst5g03105 386 FunFam Pectinesterase 84 386 - -
Arst5g03105 386 Pfam Pectinesterase 97 380 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03105 Arst-Chr5 87848782 87852563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03105 98 384 Carbohydrate Esterase AT5G47500 50.347 1.82e-101 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03105 5 87848782 87852563 Arst5g03105 5 87848782 87852563 ECH