Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03097 ATGGCAAAAAGTACTGACGGCAGTGTTTGGGCTCAGAGCTCTAATTTCCCTCAGTTCAAGCCAGAGGAAATTATTGCTATCATGAACGACTTCGCTGAGCCTGGATCGCTCGCCCCGACAGGGTTGTACCTCGGTGGCACCAAATACATGGTTATCCAAGGTGAACCCGGAGCTGTCATTCGAGGGAAGAAGGGTCCTGGTGGTGTTACCATTAAGAAGACGAATCAGGCGTTGATCATCGGAATCTACGATGAGCCAATGACTCCAGGGCAGTGCAACATGATTGTTGAAAGGCTGGGTGATTATCTCATTGATACGGGTCTTTAA 327 0.4893 MAKSTDGSVWAQSSNFPQFKPEEIIAIMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDTGL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03097 108 PANTHER PROFILIN 5 107 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Profilin signature 41 55 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Profilin signature 90 107 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Profilin signature 77 90 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Profilin signature 17 37 IPR005455 GO:0003779
Arst5g03097 108 SMART prof_2 1 108 IPR005455 GO:0003779
Arst5g03097 108 FunFam Profilin 1 108 - -
Arst5g03097 108 CDD PROF 6 107 IPR005455 GO:0003779
Arst5g03097 108 Gene3D Dynein light chain 2a, cytoplasmic 1 108 - -
Arst5g03097 108 PRINTS Plant profilin signature 48 57 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Plant profilin signature 81 94 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Plant profilin signature 94 107 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Plant profilin signature 61 76 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Plant profilin signature 4 17 IPR005455 GO:0003779
Arst5g03097 108 PRINTS Plant profilin signature 29 43 IPR005455 GO:0003779
Arst5g03097 108 Pfam Profilin 5 107 IPR005455 GO:0003779
Arst5g03097 108 SUPERFAMILY Profilin (actin-binding protein) 4 107 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03097 Arst-Chr5 87724702 87726197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03097 6 108 Cytoskeleton Gene Families AT4G29350 78.641 1.24e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03097 K05759 - tcc:18588488 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03097 5 87724702 87726197 Arst5g03097 5 87724702 87726197 ECH