Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03046 ATGGGGAGGAAGTGTTCACATTGTGGGAACATAGGGCACAATTCAAGAACATGCACAACATCACCTATGATGATGATGATGAGAGGAGGAACAACAAATAATAATAGTTTTGTAGGGCTTAGGCTCTTTGGGGTTCAACTTGATATATCATCTTCATCATGTTGTGTTGCAATGAAGAAAAGTTTTAGCATGGATTCATTGCCCTCTTCATCTTCAACAACTACTACTACTTCTTCCTTCTCATCTTCAAGATTACCCATTGATGATAACATCACCCTCAACAACAATAATTCTTCTGCTTTTGGCTACCTTTCAGATGGTCTCATCGTTCCTCCGCAAGACAGGAAAAAGGGAGTACCATGGACAGAAGAAGAGCACAGAACTTTCCTGGTTGGACTTGAGAAACTAGGAAAGGGTGACTGGAGAGGAATATCTAGAAACTATGTGACCACAAGGACTCCAACCCAAGTTGCAAGCCATGCTCAAAAATACTTTCTCAGATTGGCAACTATCAATAAGAAGAAGAGACGCTCAAGTCTCTTTGACTTGGTTGGCATAGGCAACAATAACACAAAAACAGAATTTCATGATGCTGTTGGTGGCATAACTAATTGCAAATCAGGAGATTCAAGTGTAATTGTTTGTAATGAGTCAAAATTAGAAGAAGTTGTTGAGAATAATGACATTGATCATGCCACTCTATCACTTCTAGGGCGCCTTACCCCATTTCATCAAGAAATCAAATCAGATAATGACCTAAAAGTAAAAACCATTAACCATGATAATTATAATCATAATCATCAACATCAACATCAACATCAAGCTCAACCATTTTGGCCTCATCATCAACAACACATGAATTCTTCGTCAACAGTGCCTGATTTGGAGCTCACTCTTGCAGCTCCAGAAGATCAAAATAAATCAACATCCCCCGGTTCCTTCTTTTTTGGTCCAATTAGTGTTACTTAA 969 0.387 MGRKCSHCGNIGHNSRTCTTSPMMMMMRGGTTNNNSFVGLRLFGVQLDISSSSCCVAMKKSFSMDSLPSSSSTTTTTSSFSSSRLPIDDNITLNNNNSSAFGYLSDGLIVPPQDRKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVGIGNNNTKTEFHDAVGGITNCKSGDSSVIVCNESKLEEVVENNDIDHATLSLLGRLTPFHQEIKSDNDLKVKTINHDNYNHNHQHQHQHQAQPFWPHHQQHMNSSSTVPDLELTLAAPEDQNKSTSPGSFFFGPISVT 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03046 322 ProSiteProfiles SANT domain profile. 121 169 IPR017884 -
Arst5g03046 322 ProSiteProfiles Myb-like domain profile. 113 165 IPR001005 -
Arst5g03046 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 169 IPR017930 -
Arst5g03046 322 MobiDBLite consensus disorder prediction 302 322 - -
Arst5g03046 322 MobiDBLite consensus disorder prediction 269 295 - -
Arst5g03046 322 SMART sant 117 167 IPR001005 -
Arst5g03046 322 MobiDBLite consensus disorder prediction 264 322 - -
Arst5g03046 322 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Arst5g03046 322 Gene3D - 119 171 - -
Arst5g03046 322 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Arst5g03046 322 NCBIfam myb-like DNA-binding domain, SHAQKYF class 116 167 IPR006447 GO:0003677
Arst5g03046 322 CDD SANT 120 165 IPR001005 -
Arst5g03046 322 SUPERFAMILY Homeodomain-like 115 169 IPR009057 -
Arst5g03046 322 MobiDBLite consensus disorder prediction 64 83 - -
Arst5g03046 322 FunFam transcription factor MYB1R1 119 170 - -
Arst5g03046 322 PANTHER TRANSCRIPTION FACTOR KUA1 3 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03046 Arst-Chr5 86991884 86994267 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst5g03046 Myb_DNA-binding 2.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03046 - - adu:107490116 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03046 5 86991884 86994267 Arst5g03046 5 86991884 86994267 ECH