Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03027 ATGAAGACGCAGCCTGAACCTGCCGCCGTCGTCGCCGTACCTAACCCCGAAGAGAAGAAGAGCATCAACCCGGAGCTATGGCAAGCGTGTGCGGGGCCGTTGGTGAACCTTCCGCCGGCGGGAACACACGTCTTCTACTTCCCTCAAGGACACAGTGAGCAGGTCGCAGCGTCTTTGAAGAAAGATGTGGATGGACAGATTCCAAACTATCCTAATCTTCCATCCAAGTTGTTGTGTCTCCTTCACAGTGTTACTTTGCATGCTGACCCAGAAACCGATGAAGTTTATGCTCAGATGACACTTCAACCTGTGCCTTCTTATGATAAGGAAGCTTTATTAAGATCAGATCTTGCTCTCAAGTCAAACAAGGCACAGCCTGAGTTTTTCTGCAAACAGCTGACAGCTAGTGATACAAGCACACATGGAGGTTTCTCTGTGCCTCGCCGAGCAGCAGAGAAAATATTCCCTCCTCTTGATTATTCTATGCAACCTCCTGCACAAGAACTTGTGGCTAGGGATTTGCATGATAATGTTTGGACTTTCCGTCATATATATCGAGGGCAACCAAAGCGCCACTTGCTTACAACTGGATGGAGTCTATTTGTCAGTGGAAAGAGGCTCTTTGCTGGAGACTCTGTTTTATTTATACGAGATGAAAAGCAGCAGCTTCTTTTGGGCATCAGGCGAGCTAACAGGCAACCAGCCAACATATCATCCTCGGTATTGTCAAGTGATAGTATGCATATTGGGATTCTTGCGGCAGCTGCTCATGCTGCTGCAAATAATAGTCCCTTTACCGTCTTTTACAATCCTAGGGCTAGTCCTTCAGAGTTTGTTATTCCTTTAGCCAAGTACTACAAGGCAGTGTACAGCCATCAAATATCACCTGGAATGCGTTTCCGAATGATGTTTGAAACCGAAGACTCAGGAACTAGAAGGTATATGGGTACAATTACAGGAATCAGTGATCTAGATCCTGTGAGATGGAAAAATTCACAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAAAAGCGTAGCAGGGTTTCACTTTGGGAAATTGAACCAGTGACTGCTCCTTTTTTCATCTGCCCTCCGGTAAATAATTCTACTATTTATTATTTGCATTCTAGTTCCGAAAAATAAAATCTTGCAGATGATGATCCATCTGATTTCGATAATCTTTTCAAGCGGACAATGCCTTGGCTTGGTGATGATATGTGCATGAAGGATCCTCAAGGCCTACCTGGCATGAGCTTAGTTCAATGGATGAACATGCAGCAAAATCCTAGTCTTGCTAACTCAATGCAGCCTAATTATGTACCATCATTGCCTGGATCTGTTTTGCAAAATCTTCCTGGTGCAGATATTTCCCGTCAGCTGGGGTTTTCTTCTTCACAAATTCCTCAGCCTAACAATGTAGCCTTCAACACTCAGAGGCTACTTCAGACTGCACAACAACTTGATCATCTTCAGAAGCTACCGTCAGCATCTGTCAACTTGGGAACAGTGATGCAGCCGCAGCAACAGTTGGGTGATATCTCTCAACAATCTAAGCAGAACTTAGGAAGTCAAACTCTTCCACAGAGTCAAGTTCAGGCCCAGATCTTGCATCCCCAGAATCTTGTCCAAACAAACAATATTCTTCAACAGCAACAATCATCCATTCAAAACCACCAATTCAATCGATGTGTCCCTCAGAACCCTCCACAGCAGCAGCAACAGCAACAGACAATTATGGGTCAGAATCAGCAACAAACTATGGTCCCATCTACTATACCTGACCATGTTCAACAGTTACAGATGTCTGATAATCAGATTCAGCTTCAATTGTTACAAAAGCTTCAACAGCAACAGCAAACACTCTTAGCACAACAATCTGCGCTGCAGCAGCCTTCTCAACTTGCTCAAATCCAAGATCAGCAGAGGCAACTGTTAGATGCAGCACAGAGCTTCTCTAGGTTAGTCCCTCCTGGTCAAGTGCTTGAAATTCCTCCGGTACTTCAAAATTCACTCCCAGAGAGTAATGCGATCACAAATCAAATGACAAAGGCTGGTCGGAGCAATATACATATCTCTCATTTGCCTCAGCAGCCAAAGCCTCAGCAACAATCTGGCTTGCTGCCTGAGATGTCTGGTCAAATGGCACTTCCCCCTACCCCTTCACCAAACCAGCTCTCTGCTGCTGGCAGTGGCATACTGAATGGAGCAGCTGTAGCTGGACAATCTGTAATTACTGATGATGTTCCATCTTGCTCCACCTCACCTTCTACAAATAACTCTGCCAGTGCAGTTCCATTATTGATAAATTCCCAGTTACATAGAAGCTCAATAACTGCTGATGACATGGCTCAATCTACTGCAACATTATTGAGTTCAGGTGCTTTAGAAACCATGTCATCAGGTGCAAACATGGTAAAAGATTTACAGCCCAAGTCTGAAGTCAAGCCTTCTTTAAACATCTCCAAAAATCAGAATCAAGGGAGTTTGGTTCATCAGACATACTTGAATGGTGCTGCTGCTCAAACAGATTATTTGGATACATCATCTTCGACAACTTCAGTTTGCCTATCTCAGAGTGATGCTCACATGCATCAGAATAACAACCCGATGTCTTACAATCCACAGTCTATGTTGTTTAGAGACAACAGTCAGGATGGGGAAGTTCAGGCAGATACTAGGAGTAATGTTCCATATGGCAATAATGTTGATAGCCAAATGGGAATGCCATTGAATCCAGATTCTCTTTTACCCAAAGGCACAGTGGGGATGGGGAAGGATATGTCGAATAATTCAACAATAGATGATAGTAGCTTCTTGAATAGGGGTGGATGGGCTCCACCACCACCACCACCACCACCGCCATTGCCAGCACCACAGTTTCAGCGTATGAGGACATATACCAAGGTTTATAAACGAGGAGCTGTCGGAAGGTCCATAGACATCACTCGGTATTCAGATTATGAGGAGCTTAAACATGATCTAGCTCGCAGATTTGGCATAGAGGGCCAGCTGGAGGATCGACACAGGATAGGCTGGAAACTTGTCTATGTAGATCATGAAAATGATGTTCTACTAGTGGGAGACGACCCTTGGGAGGAGTTTGTTAATTGTGTACGCTGTATCAAGATTCTTTCTCCCCAAGAAGTACAACAGATGAGCTTGGATGGAGATTTTGGCAATGCTAGCCTTCCAAATCAAGCTTGTAGCAGCTCTGATGGTGGGAATACTTGA 3246 0.4458 MKTQPEPAAVVAVPNPEEKKSINPELWQACAGPLVNLPPAGTHVFYFPQGHSEQVAASLKKDVDGQIPNYPNLPSKLLCLLHSVTLHADPETDEVYAQMTLQPVPSYDKEALLRSDLALKSNKAQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFFICPPVNNSTIYYLHSSSEKXNLADDDPSDFDNLFKRTMPWLGDDMCMKDPQGLPGMSLVQWMNMQQNPSLANSMQPNYVPSLPGSVLQNLPGADISRQLGFSSSQIPQPNNVAFNTQRLLQTAQQLDHLQKLPSASVNLGTVMQPQQQLGDISQQSKQNLGSQTLPQSQVQAQILHPQNLVQTNNILQQQQSSIQNHQFNRCVPQNPPQQQQQQQTIMGQNQQQTMVPSTIPDHVQQLQMSDNQIQLQLLQKLQQQQQTLLAQQSALQQPSQLAQIQDQQRQLLDAAQSFSRLVPPGQVLEIPPVLQNSLPESNAITNQMTKAGRSNIHISHLPQQPKPQQQSGLLPEMSGQMALPPTPSPNQLSAAGSGILNGAAVAGQSVITDDVPSCSTSPSTNNSASAVPLLINSQLHRSSITADDMAQSTATLLSSGALETMSSGANMVKDLQPKSEVKPSLNISKNQNQGSLVHQTYLNGAAAQTDYLDTSSSTTSVCLSQSDAHMHQNNNPMSYNPQSMLFRDNSQDGEVQADTRSNVPYGNNVDSQMGMPLNPDSLLPKGTVGMGKDMSNNXSTIDDSSFLNRGGWAPPPPPPPPPLPAPQFQRMRTYTKVYKRGAVGRSIDITRYSDYEELKHDLARRFGIEGQLEDRHRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNASLPNQACSSSDGGNT 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03027 1082 MobiDBLite consensus disorder prediction 679 714 - -
Arst5g03027 1082 Pfam AUX/IAA family 970 1055 IPR033389 -
Arst5g03027 1082 MobiDBLite consensus disorder prediction 806 830 - -
Arst5g03027 1082 MobiDBLite consensus disorder prediction 930 944 - -
Arst5g03027 1082 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 624 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst5g03027 1082 SUPERFAMILY CAD & PB1 domains 983 1048 - -
Arst5g03027 1082 SMART B3_2 129 231 IPR003340 GO:0003677
Arst5g03027 1082 MobiDBLite consensus disorder prediction 861 965 - -
Arst5g03027 1082 FunFam Auxin response factor 127 231 - -
Arst5g03027 1082 Pfam Auxin response factor 255 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst5g03027 1082 MobiDBLite consensus disorder prediction 949 965 - -
Arst5g03027 1082 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Arst5g03027 1082 Gene3D - 965 1059 - -
Arst5g03027 1082 SUPERFAMILY DNA-binding pseudobarrel domain 119 258 IPR015300 -
Arst5g03027 1082 Gene3D - 293 364 - -
Arst5g03027 1082 ProSiteProfiles PB1 domain profile. 970 1054 IPR000270 GO:0005515
Arst5g03027 1082 FunFam Auxin response factor 293 364 - -
Arst5g03027 1082 CDD B3_DNA 128 220 IPR003340 GO:0003677
Arst5g03027 1082 MobiDBLite consensus disorder prediction 861 913 - -
Arst5g03027 1082 Gene3D - 127 230 IPR015300 -
Arst5g03027 1082 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Arst5g03027 1082 MobiDBLite consensus disorder prediction 566 590 - -
Arst5g03027 1082 MobiDBLite consensus disorder prediction 679 734 - -
Arst5g03027 1082 FunFam Auxin response factor 965 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03027 Arst-Chr5 86651889 86659107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03027 7 483 B3 DNA Binding Superfamily AT5G20730 66.397 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst5g03027 B3 1.6e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03027 - - ccaj:109803454 1612.05