Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03023 ATGGCACTCATCCTCGTCACCGCCGTCGTCGCCATCCTCATGATGCACAGCGTGGCCATCGGCGCCTCCGACACCGACCTCCTCCTCAAGTTCAAGGAGTCCCTTCAGGTAAACAACGACGCCTTATCGTCATGGAATTCAACAACGCCTCCATGTAACGGAGCGAAGGCGAATTGGCCTCACATTTTGTGCTATAACGGGAACACATGGGGGATAAAGCTCGAGAGGATGGGGATCAAAGGATCCATCGATGTGGACGCCTTGAAGGGTCTACCATATCTGAGGACACTTAGTCTCATGCACAATAATCTTGAAGGCTCGTGGCCGGAGCTCAACAAATTGCCGGGATTGAAGGCGATCTATCTTTCCGATAACCATTTCTCCGGAGAGATTCCGACCGATGCCTTCGCCGGTTTGCAATGGCTGAAGAAGATTTACTTGTCCAATAACAAGTTTAGTGGTCCGTTGCCAAGTTCGTTATCCACAATGCCAAGGCTTAGAGAGCTGAGGTTGGAGGGAAACCAATTCAGTGGAAATATTCCGAGTATGCCACCGACATTGAGATCAATGAGCCTCGCTGATAATAAATTACAGGGACAAATACCTTCCGATTTGACCAAGTTTCCTCGTGCATCTTTCGCCGGTAACAAAAAGTTATGTGGAGCGCCATTACGTAACAAATGTCCGTCGAATAAGACATCATTAGCGAGCATAATAGTGCTTGCTATATTTGCTGCGGTGGCAATATTTGTGATTGCAGCAGTGATAGTACTCCTTCTTCACAGAAAAAAACAAAGACAACAACGCAGAGAGCCTTCTTCTTCATTCGAGAGTCCATCAATACCGTCAAGCTTCCACAAGAAAGTAGGAGATCTTTCCGATGATGGTGGTAGCCACAGGTCTTTAAGGTCAACTGGATCTTCCCGTGGAAGCAAGAAACATAGCATGAGGTTGTCATTTGTGAAGAGGGAGGATGACAGGGAAGAGTTTGATATGCAAGATCTTTTGAAGGCCTCTGCTGAAATTTTGGGCAGTGGTTGTTACAGTTCATCCTATAAGGCTTCTTTGTTAAGTGGACCAATGGTGGTTGTGAAAAGATTCAAGCAGATGAACAATTGCAATAAGGAAGATTTTCAAGAACACATGAGAAGGATTGGGATGTTGAGTCATCCTAATTTGCTTCCTTTGGTAGCTTACTACTACAGAAGGGAAGAGAAGCTCTTGATTACTGATTTTGTTCCTAATGGCAGCTTGGCTGTTCGCCTTCACGGACACCAAGCATTGGGGCAACCAAGCCTTGATTGGCCAACAAGATTAAAGATAGTGAAAGGCATATCAAAAGGTCTTGAATATCTATACAAAGAGATGCCAAGTCTAATAGCACCACATGGACATCTAAAATCATCAAATGTTCTTCTAAATGAAAACTATGAACCAGTCCTAACAGATTATGGTTTAGTGCCGGTGATTAATCAAGAGCTTGCATCAGACATTATGGTAATTTACAAGTCACCAGAGTATTTGCAACAAGGCAGAGTTACAAAGAAGACTGATGTTTGGAGCCTTGGGATCTTAATCTTGGAGATCCTAACTGGAAAATTCCCAGCAAATTTCTTGCAACAAGGGAGAGGGAGTGAATTGAGCTTAGCAAATTGGGTTGATTCAGTTGTTCCTGAAGAGTGGAGTAGTGAGGTTTTTGATAAAGAAATGGGTGCAAGCAAAGAAAATGAGGTTGAGATGGCAAAGCTATTAAGGATTGCATTGGCTTGTTGTGAAGCTGATGTTGAAAAGAGATTGGATGTCAAAGAAGCTGTGGATAGAATCCAAGAGGTGAAGGAGAGTGGTGAAATTGATCTTAATTAA 1863 0.4375 MALILVTAVVAILMMHSVAIGASDTDLLLKFKESLQVNNDALSSWNSTTPPCNGAKANWPHILCYNGNTWGIKLERMGIKGSIDVDALKGLPYLRTLSLMHNNLEGSWPELNKLPGLKAIYLSDNHFSGEIPTDAFAGLQWLKKIYLSNNKFSGPLPSSLSTMPRLRELRLEGNQFSGNIPSMPPTLRSMSLADNKLQGQIPSDLTKFPRASFAGNKKLCGAPLRNKCPSNKTSLASIIVLAIFAAVAIFVIAAVIVLLLHRKKQRQQRREPSSSFESPSIPSSFHKKVGDLSDDGGSHRSLRSTGSSRGSKKHSMRLSFVKREDDREEFDMQDLLKASAEILGSGCYSSSYKASLLSGPMVVVKRFKQMNNCNKEDFQEHMRRIGMLSHPNLLPLVAYYYRREEKLLITDFVPNGSLAVRLHGHQALGQPSLDWPTRLKIVKGISKGLEYLYKEMPSLIAPHGHLKSSNVLLNENYEPVLTDYGLVPVINQELASDIMVIYKSPEYLQQGRVTKKTDVWSLGILILEILTGKFPANFLQQGRGSELSLANWVDSVVPEEWSSEVFDKEMGASKENEVEMAKLLRIALACCEADVEKRLDVKEAVDRIQEVKESGEIDLN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03023 620 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03023 620 Gene3D Ribonuclease Inhibitor 184 231 IPR032675 -
Arst5g03023 620 ProSiteProfiles Leucine-rich repeat profile. 93 115 IPR001611 GO:0005515
Arst5g03023 620 SUPERFAMILY L domain-like 23 224 - -
Arst5g03023 620 FunFam Pollen receptor-like kinase 1 413 620 - -
Arst5g03023 620 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 614 IPR046959 -
Arst5g03023 620 MobiDBLite consensus disorder prediction 299 314 - -
Arst5g03023 620 Gene3D Transferase(Phosphotransferase) domain 1 413 618 - -
Arst5g03023 620 Gene3D Phosphorylase Kinase; domain 1 303 412 - -
Arst5g03023 620 Pfam Leucine rich repeat N-terminal domain 23 64 IPR013210 -
Arst5g03023 620 Gene3D Ribonuclease Inhibitor 136 183 IPR032675 -
Arst5g03023 620 Gene3D Ribonuclease Inhibitor 23 135 IPR032675 -
Arst5g03023 620 Pfam Leucine rich repeat 115 176 IPR001611 GO:0005515
Arst5g03023 620 MobiDBLite consensus disorder prediction 267 318 - -
Arst5g03023 620 Pfam Protein tyrosine and serine/threonine kinase 341 606 IPR001245 GO:0004672|GO:0006468
Arst5g03023 620 SUPERFAMILY Protein kinase-like (PK-like) 341 609 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03023 Arst-Chr5 86597945 86601644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03023 4 613 Receptor kinase-like Gene Family AT5G35390 50.869 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst5g03023 PK_Tyr_Ser-Thr 7.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03023 - - gmx:100804368 746.503