Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02993 CCCCTAAAATTGGCTGTCAAACAGGCTTTGGATGTTGCTAGAGGCATGGCATATGTTCATGGACTTGGGTTGATCCACAGGGATTTGAAGTCTGATAATCTTCTGATTTTTGGGGACAAATCAATTAAAATTGCTGACTTTGGTGTTGCTCGCATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGAACATACCGTTGGATGGCTCCGGAGATGATCCAGCATAGGCCTTACACACAAAGAGTGGATGTGTATAGCTTTGGGATTGTTCTTTGGGAGCTTATCACCGGAATGCTTCCATTTCAGAACATGACAGCAGTGCAGGCTGCATTTGCAGTTGTGAACAAAAATGTTCGCCCGATCATACCCAACGATTGTTTACCTGTTCTCCGTGACATTATGACAAGATGCTGGGATCCCAACCCTGATGTCCGGCCACCATTTGCAGAAATTGTAGGAATGCTTGAGAATGCAGAGACCGAGATCATGACAACTGTTCGGAAGGCTCGATTCAGGTGTTGCATGACACAACCAATGACTGCTGACTGA 552 0.4583 MEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQSLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQRVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPIIPNDCLPVLRDIMTRCWDPNPDVRPPFAEIVGMLENAETEIMTTVRKARFRCCMTQPMTAD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02993 240 SUPERFAMILY Protein kinase-like (PK-like) 2 213 IPR011009 -
Arst5g02993 240 Gene3D Transferase(Phosphotransferase) domain 1 1 237 - -
Arst5g02993 240 SMART serkin_6 3 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02993 240 PANTHER SERINE-THREONINE PROTEIN KINASE 4 218 - -
Arst5g02993 240 CDD STKc_MAP3K-like 2 213 - -
Arst5g02993 240 FunFam serine/threonine-protein kinase HT1 42 235 - -
Arst5g02993 240 PIRSF ILK 1 232 - -
Arst5g02993 240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Arst5g02993 240 Pfam Protein tyrosine and serine/threonine kinase 2 212 IPR001245 GO:0004672|GO:0006468
Arst5g02993 240 PRINTS Tyrosine kinase catalytic domain signature 140 162 IPR001245 GO:0004672|GO:0006468
Arst5g02993 240 PRINTS Tyrosine kinase catalytic domain signature 184 206 IPR001245 GO:0004672|GO:0006468
Arst5g02993 240 PRINTS Tyrosine kinase catalytic domain signature 75 93 IPR001245 GO:0004672|GO:0006468
Arst5g02993 240 PRINTS Tyrosine kinase catalytic domain signature 121 131 IPR001245 GO:0004672|GO:0006468
Arst5g02993 240 PRINTS Tyrosine kinase catalytic domain signature 37 50 IPR001245 GO:0004672|GO:0006468
Arst5g02993 240 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02993 Arst-Chr5 85823642 85824779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02993 9 240 MAP Kinase Kinase Kinase AT2G24360 86.207 2.25e-152 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Arst5g02993 PK_Tyr_Ser-Thr 1.7e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02993 - - adu:107490079 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02993 5 85823642 85824779 Arst5g02992 5 85803127 85805418 PCT