Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02992 ATGTTGGAAGGTGGTGCTAAATTCCCTGGATTAATAGATCTCAACAAGCATACAACTGACAACTATTATGATTTCTCTCAAGGCTTTTACCATAAGCTTGGGGAGGGTACTAATATGTCGATTGACAGCATGCAAACAAGTAATGGTGGGGGATCTGTTGCGATGTCCATAGATAATAGTAGTGTTGGGTCTAATGATTCCCATACTCGCATATTGAACCACCAAGGGTTGCGGAGACGTGCAAATGATAACTACTCTGTTCAAAACAGTGTAAATCGTCGAGGAAGAGTCACACATGCATTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGATAGCAGTTCCCCAACTGAGGGGCTTGAAAATTTTGATGAGTGGACAATTGATTTGAGGAAGCTTAATATGGGTGAGGCCTTTGCTCAAGGAGCTTTTGGGCTGGCTACACTAAAGCATCCTAATATAGTTCGTTTCATTGGTGCATGCAGAAAACCGATGGTATGGTGCATTGTAACGGAATATGCCAAAGGGGGTTCTGTTAGACAGTCTTTAATGAAGCGTCAGAACCGGTCAGTTCCCCTAAAATTGGCTGTCAAACAGGCTTTGGATGTTGCTAGAGGCATGGCATATGTTCATGGACTTGGGTTGATCCACAGGGATTTGAAGTCTGATAATCTTCTGATTTTTGGGGACAAATCAATTAAAATTGCTGACTTTGGTGTTGCTCGCATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGAACATACCGTTGGATGGCTCCGGAGATGATCCAGCATAGGCCTTACACACAAAAGGTGGATGTGTATAGCTTTGGGATTGTTCTTTGGGAGCTTATCACCGGAATGCTTCCATTTCAGAACATGACAGCAGTGCAGGCTGCATTTGCAGTTGTGAACAAAAATGTTCGC 933 0.4352 MLEGGAKFPGLIDLNKHTTDNYYDFSQGFYHKLGEGTNMSIDSMQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVQNSVNRRGRVTHALSDDALAQALMDSSSPTEGLENFDEWTIDLRKLNMGEAFAQGAFGKLYRGTYNGEDVAIKILERPESDLSKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQSLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPIIPNDCLPVLRDIMTRCWDPNPDVRPPFAEIVGMLENAETEIMTTVRKARFRCCMTQPMTA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02992 413 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 390 - -
Arst5g02992 413 FunFam serine/threonine-protein kinase HT1 216 409 - -
Arst5g02992 413 Gene3D Transferase(Phosphotransferase) domain 1 216 409 - -
Arst5g02992 413 Gene3D Phosphorylase Kinase; domain 1 122 215 - -
Arst5g02992 413 PRINTS Tyrosine kinase catalytic domain signature 249 267 IPR001245 GO:0004672|GO:0006468
Arst5g02992 413 PRINTS Tyrosine kinase catalytic domain signature 295 305 IPR001245 GO:0004672|GO:0006468
Arst5g02992 413 PRINTS Tyrosine kinase catalytic domain signature 211 224 IPR001245 GO:0004672|GO:0006468
Arst5g02992 413 PRINTS Tyrosine kinase catalytic domain signature 358 380 IPR001245 GO:0004672|GO:0006468
Arst5g02992 413 PRINTS Tyrosine kinase catalytic domain signature 314 336 IPR001245 GO:0004672|GO:0006468
Arst5g02992 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Arst5g02992 413 CDD STKc_MAP3K-like 140 387 - -
Arst5g02992 413 ProSiteProfiles Protein kinase domain profile. 133 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02992 413 FunFam Serine/threonine-protein kinase isoform 1 123 215 - -
Arst5g02992 413 SUPERFAMILY Protein kinase-like (PK-like) 115 387 IPR011009 -
Arst5g02992 413 SMART serkin_6 133 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02992 413 Pfam Protein tyrosine and serine/threonine kinase 134 386 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02992 Arst-Chr5 85803127 85805418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02992 1 412 MAP Kinase Kinase Kinase AT2G24360 78.692 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Arst5g02992 PK_Tyr_Ser-Thr 6.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02992 - - gmx:100788536 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02993 5 85823642 85824779 Arst5g02992 5 85803127 85805418 PCT