Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02977 ATGGACAAAAAACCGTGCAACTCATCTCAAGACCCTGAAGTGAGAAAGGGACCTTGGACAGTGGAAGAAGATTTGATTTTGATCAACTATATTGCAAATCATGGAGAAGGTGTTTGGAACTCCTTAGCCAAAGCCGCTGGTCTTAAACGCACTGGAAAGAGTTGTAGACTCAGGTGGCTAAACTACCTTCGCCCTGATGTTAGAAGAGGAAATATCACACCTGAGGAACAACTTTTGATCATGGAGCTTCATGCAAAATGGGGAAACAGATTTCTTATCATTTCATTTATATATAGTACTGACAATGAGATTAAGAATTTCTGGAGGACAAGGATCCAGAAGCATATCAAGCAAGCTGAGAACTTTCAATCACAACAAAGTAATTCTGATCATGATCATCAGATCAATGATAATAATTACCATCATCATCATCATCATAATAGTTATGCAAGCACTTCTAGCCATGTTTCAAACATGGCTGAGGCAATGGAGATTTCATATTCTTCTCCACCCACATACCAAGGAACTACATTGGAGCCATTCACAACTCATCACAATCATCAACAACAACAACAACAACATCATCATCATCATCATCAATACCCTTCAACAATCCCTACTACTGACCAATCTAGTTGTTGTACCAATGACAACAACAACAACTATTGGAGCATGGAGGATCTCTGGTCCATGCAATTACTCAATGGGGATTAA 714 0.3908 MDKKPCNSSQDPEVRKGPWTVEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRFLIISFIYSTDNEIKNFWRTRIQKHIKQAENFQSQQSNSDHDHQINDNNYHHHHHHNSYASTSSHVSNMAEAMEISYSSPPTYQGTTLEPFTTHHNHQQQQQQHHHHHHQYPSTIPTTDQSSCCTNDNNNNYWSMEDLWSMQLLNGD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02977 237 MobiDBLite consensus disorder prediction 120 150 - -
Arst5g02977 237 Gene3D - 73 157 - -
Arst5g02977 237 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Arst5g02977 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 116 IPR017930 -
Arst5g02977 237 SMART sant 68 114 IPR001005 -
Arst5g02977 237 SMART sant 15 65 IPR001005 -
Arst5g02977 237 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Arst5g02977 237 SUPERFAMILY Peptide methionine sulfoxide reductase 144 211 IPR036509 GO:0008113
Arst5g02977 237 Gene3D - 16 68 - -
Arst5g02977 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Arst5g02977 237 CDD SANT 18 63 IPR001005 -
Arst5g02977 237 MobiDBLite consensus disorder prediction 178 211 - -
Arst5g02977 237 FunFam Myb transcription factor 16 68 - -
Arst5g02977 237 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Arst5g02977 237 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 11 224 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02977 Arst-Chr5 85538054 85541788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02977 10 237 MYB Transcription Factor Family AT3G01530 48.261 2.81e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst5g02977 Myb_DNA-binding 5.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02977 K09422 - gmx:778046 296.204