Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02963 ATGAATGTGGCAAACGGAGATAGAGTGGTGATATGGGACTTTTCTAACAAAACAGTGACTACAACAACAACTACTCATCATGCTGCTCCGCTGCTGGTTACAGAGAAGGATCCAAGGGCTAATGCCAATGCTCGTCCCCGCCGCCGCAACCACATTCGTAGCCAAAGGGCTAATGCTAATGCGCCTCCCACTGGCAACCACATTCATGGTCAATGGACACCGGATCAGGACATGAATGGGAAGCAGTGTAGAGAGAGATGGCACAACCATCTCCAGCCAAATCTTAAGAAAGGGCCATGGACTTGGAAAGAAGACATGATTCTGATCAAAGCCCACAAGGAAGCTGGTGGAAACAAATGGGCTGAGATTTCAAAGAGATTGCCAGGTAGGACTGATAACTCCATCAAGAATCGTTGGAATACAATTAAGAGGAGTAGGCCCACAAAAAAGTACAAGTTCATTAAGCCCAATAACAACAATAATTTTGATGGGTCAAAAATGCTCAAAGCCTATATCGATGCAGTGGCTGCAGCCCAAGCAGAAGTAGCAACTTTATCAAAGTCAAAGTCAAAGAATGATTCCAACAAGAATAAGGGCAAGGCCAGGGTTAAAATTGATCTCAATTCTATTCCCTTGGAGTTTCCAAATGATGACGTCATCAACATTCATGGAAGTGATGTTGGTGGTGAATATGGCAACTGGGTTTAG 708 0.4435 MNVANGDRVVIWDFSNKTVTTTTTTHHAAPLLVTEKDPRANANARPRRRNHIRSQRANANAPPTGNHIHGQWTPDQDMNGKQCRERWHNHLQPNLKKGPWTWKEDMILIKAHKEAGGNKWAEISKRLPGRTDNSIKNRWNTIKRSRPTKKYKFIKPNNNNNFDGSKMLKAYIDAVAAAQAEVATLSKSKSKNDSNKNKGKARVKIDLNSIPLEFPNDDVINIHGSDVGGEYGNWV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02963 235 CDD SANT 99 143 IPR001005 -
Arst5g02963 235 MobiDBLite consensus disorder prediction 55 70 - -
Arst5g02963 235 SUPERFAMILY Homeodomain-like 79 146 IPR009057 -
Arst5g02963 235 ProSiteProfiles Myb-like domain profile. 92 143 IPR001005 -
Arst5g02963 235 SMART sant 96 145 IPR001005 -
Arst5g02963 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 147 IPR017930 -
Arst5g02963 235 Pfam Myb-like DNA-binding domain 97 142 IPR001005 -
Arst5g02963 235 MobiDBLite consensus disorder prediction 38 70 - -
Arst5g02963 235 Gene3D - 99 161 - -
Arst5g02963 235 PANTHER MYB PROTEIN-RELATED 69 191 - -
Arst5g02963 235 Gene3D - 77 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02963 Arst-Chr5 85426699 85430102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02963 80 198 MYB Transcription Factor Family AT4G18770 45.378 8.40e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst5g02963 Myb_DNA-binding 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02963 K09422 - aip:110263065 414.846