Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02940 ATGGCTTCATCATCATCTTCTTCAAGCTACTCAAATTCTCCATGTGCGGCATGCAAGTTCTTGAGAAGAAAATGCTTACCGGATTGCATTTTCGCGCCCTATTTCCCGCCGGAAGAGCCTCAAAAATTCGCAAACGTTCACAAGATCTTCGGCGCAAGCAATGTAAGCAAGCTTCTAAATGAAGTTCAGCCTCATCAAAGGGAAGACGCGGTGAATTCTCTTGCATATGAGGCTGAAGCAAGGATCAAGGATCCAGTTTATGGTTGTGTTGGTGCAATTTCAGTGCTCCAAAGACAAGTTATTAGGCTCCAAAAGGAGCTTGATGCCACAAATGCTGATTTGATGAGATATTGCAATGAAGTTCCTAACCCTACTTTAGGAAGAAGGAATAATCATAATAATAACAACAATAATAATAATTTGGGTGAAGGAGGTGGTGGTTCTTTTTATTTCCCTTCTTCTTCTTCTTCAGCTTGGAACAATGATGATACTTGTGGTGGTGGGGATGGCTACCATAGAGGTTGA 525 0.4171 MASSSSSSSYSNSPCAACKFLRRKCLPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLMRYCNEVPNPTLGRRNNHNNNNNNNNLGEGGGGSFYFPSSSSSAWNNDDTCGGGDGYHRG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02940 174 Coils Coil 93 120 - -
Arst5g02940 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 136 - -
Arst5g02940 174 MobiDBLite consensus disorder prediction 124 147 - -
Arst5g02940 174 Pfam Lateral organ boundaries (LOB) domain 14 110 IPR004883 -
Arst5g02940 174 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02940 Arst-Chr5 85172085 85174505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02940 8 117 AS2 family AT3G27650 86.364 1.76e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst5g02940 LOB 2e-42 No_clan