Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02928 ATGGAGTCACCTGCAAATGGAGTAGTAGAGTCTTTATCAGAGGTTCAGAATTCAGTTTCTGTTGCACAGCAGCATGATCCTCCTTCTACATCCGGGACTCCCCGTCCTACGCGGCCTCCCTTAAGACCATCTCGGAATCATGTTCATGGGCCTTCTTCCATGCCCCATTCGGCCAGTCACCACCATAGTCACGGATCAAAGTCCATCATCCATCATCAAAACACCTATGTAGTTAATCAGAAGCATTCCTATTTGGAGGGTGAAAATGCGGACCATGAAGGATTGCCTTCAAAATCTTGCATCAAGCAATCATTTGACGATTCCAAGACTTGTGATTCAAGTGTCATATTCGAATCTGACATTGACACTTCCATCTCAGGTCCGTCAAGACGAGCCGTTGGTAATCACAGCAGGAGTTACTGCCCATCAGAGGTTACTTTTTATGCAAGTCCTCAGAATAGTTGCTATGCTGCTACTGTCTATTCGGAAGCTAAACAAAGTTTCACCTATACTGAAATTAGTGAGTGTGGTACTAGTGTTGATAAGTCACTAGAAAGTGGCATTGAGGTTGCGAATTCCTGTGATTTTAATGAGAGTAGGAAGACCAGCATCTGCAGGGCGAGTACTGGGAGCGATATCAGTGATGAGAGCAGCACCAGTAGCTTGAGTAGCGCTATGTATAAACCACATAAGGCGAATGATAAACGGTGGGAAGCAATTCAGGCCATCCGAGCGTGTGATGGTATGTTGGAGATGAGACATTTCAGGTTGTTGAAGAAATTGGGACGCGGAGACATTGGAAGTGTGTATCTAGCTGAACTGAGCGGCACGAGGACTTCTTTTGCCATGAAAATAATGAACAAGACAGAGCTAGCGAATCGCAAGAAGCTTGTGAGGGCTCAGACTGAGAGAGAGATATTGCAGTCCTTAGATCATCCTTTTCTGCCCACATTGTATACACATTTTGAGACTGAGACATTCTCCTGCTTGGTAATGGAGTTCTGCCCCGGTGGAGACTTGCATGCACTCAGGCAAAGGCAACCCGGGAAGTATTTCTCGGAGCACGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTATTTACATATGCTTGGGATCATCTACAGAGACCTTAAACCCGAGAACGTGTTGGTGAGGGAAGATGGTCATATAATGCTGTCGGATTTCGACCTCTCTCTAAGGTGCACGGTCAGTCCAACTCTTGTAAAGTCATCAAACTCTATCTTGGAGACGAAGACCTCAGGATACTGCACTCAGCCTTCTTGCGCCGAACCGACTTGTTCAATGCAGCCAGACTGCATCCAACCGGCATGCTTCTCGCCTCGATTTCTTTCCAGCAAATCCAAGAAAGGAAAGAAGTACAAGCCAAAGAATGACATGCATCATCAGGTGACCCCTCTTCCGGAGCTTATTGCCGAGCCAACAAATGCCAGATCGATGTCCTTCGTTGGTACACACGAGTACTTGGCTCCTGAGATCATTAAGGGCGAAGGGCATGGCAGTGCTGTGGACTGGTGGACATTTGGGATATTCCTATACGAGCTCTTGTTTGGGCGGACACCCTTCAAGGGCTCGGCCAATCGAGCAACGCTGTTTAACGTTGTTGGCCAGCCCTTAAGGTTTCCAGAGTCTCCAACTGTCAGTTTTGCTGCCAGGGACTTGATTAGGGGCTTACTCGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGTGGAGCCACCGAAATCAAACAGCATCCGTTCTTTCAGAATGTTAACTGGGCGCTGATCCGGTGCGCGAATCCTCCTGAGGTTCCACGACTCGTTAAACCAACCCCAGTTGAGATGGACCCTGGTTTGAACCCTTCTGGTAATTATTTAGACATTGATTTCTTTTGA 1908 0.4733 MESPANGVVESLSEVQNSVSVAQQHDPPSTSGTPRPTRPPLRPSRNHVHGPSSMPHSASHHHSHGSKSIIHHQNTYVVNQKHSYLEGENADHEGLPSKSCIKQSFDDSKTCDSSVIFESDIDTSISGPSRRAVGNHSRSYCPSEVTFYASPQNSCYAATVYSEAKQSFTYTEISECGTSVDKSLESGIEVANSCDFNESRKTSICRASTGSDISDESSTSSLSSAMYKPHKANDKRWEAIQAIRACDGMLEMRHFRLLKKLGRGDIGSVYLAELSGTRTSFAMKIMNKTELANRKKLVRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNSILETKTSGYCTQPSCAEPTCSMQPDCIQPACFSPRFLSSKSKKGKKYKPKNDMHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRLVKPTPVEMDPGLNPSGNYLDIDFF 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02928 635 FunFam serine/threonine-protein kinase D6PK-like 339 406 - -
Arst5g02928 635 SMART serkin_6 255 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02928 635 Pfam Protein kinase domain 489 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02928 635 Pfam Protein kinase domain 256 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02928 635 MobiDBLite consensus disorder prediction 1 68 - -
Arst5g02928 635 Gene3D Transferase(Phosphotransferase) domain 1 341 609 - -
Arst5g02928 635 SUPERFAMILY Protein kinase-like (PK-like) 237 615 IPR011009 -
Arst5g02928 635 MobiDBLite consensus disorder prediction 9 31 - -
Arst5g02928 635 PANTHER FLIPPASE KINASE 1-RELATED 83 612 - -
Arst5g02928 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Arst5g02928 635 CDD STKc_phototropin_like 253 614 - -
Arst5g02928 635 ProSiteProfiles Protein kinase domain profile. 255 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02928 635 Gene3D Phosphorylase Kinase; domain 1 247 340 - -
Arst5g02928 635 FunFam Serine/threonine-protein kinase D6PK-like 253 338 - -
Arst5g02928 635 FunFam serine/threonine-protein kinase D6PK-like 487 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02928 Arst-Chr5 85017771 85020912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02928 161 635 AGC Kinase Gene Family AT5G47750 69.800 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Arst5g02928 Pkinase 8.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02928 K08286 - gmx:100810909 980.319