Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02925 ATGGAGAAAGTGGTTGTGGAAAACCTTTGGAATGGTGACAGAGATGCACAAATTCAAGCAGCTATGGAGCTAAGTAGATTTAGTAGTAAGCAAAGGCACAAGTTGGAAGAAAGTGGAGTCTTGGTTCCTCTGGTTTCCATGCTTCATTCTGAAGACTATGAAGCCATTGAAGCTTCTCTCTGTGCTCTACTCAGTCTTGCATTCGGCAGCGAACGAAACAAGAGAAGGATCATCAAGTGTGGAGCTTTGCCAGTTCTGCTGAATCACCTTCACTCTCAAAGCCAAACAGTGGTGCAATTGACAGTAGCAGCCATGCTAACCCTCTCATCCTGCAAGGCAAATAAGGTTGCAATTGCTTCATCCGGTGCTCTACAACACTTGGCTGAATTTGTAAATAGCGGTGACATTCAGTTACAGCTTGATGTTGTGGCCACAATCCACAACCTCTCAACCTGCGAAGAGATTGTTCCATTGATCGTTGCTTCTGGCATTATACTTTCATTGATTGAACTGGTCCACAACTCTGTGAAATCATCTCCGCTGGGTGAAAAGGCGATTGGTTTGCTCGAAAATATTGTCTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTGTTGGTGGGGCAATTCGGATACTGGTCGAGACTATTGAAGATGGATTCACTAGGGGTATACTTTTCCTTATATGCCAAAGTTGCAGAGAGAAATACAGAGGTTTGATTCTGAGAGAGGGAGTGATGCCAGGACTGCTTCAGTTAAGCATAGATGGAACGCGGAGAGCCAAGAACATGGCTCGAGAACTGTTGTTGCTTCTGAGGGATTACTCCGATTATAGTTCAAGACAAAAACAAATGAATCATGAGCTCATAGAGCGGATCATGGAAGAAATTGATGCAGATGGAGAGAAATTGGCTGATGCTAAGCTGCGTTTAGTGGAGGAGATGATTGCAAAGCTGAACACATAA 966 0.442 MEKVVVENLWNGDRDAQIQAAMELSRFSSKQRHKLEESGVLVPLVSMLHSEDYEAIEASLCALLSLAFGSERNKRRIIKCGALPVLLNHLHSQSQTVVQLTVAAMLTLSSCKANKVAIASSGALQHLAEFVNSGDIQLQLDVVATIHNLSTCEEIVPLIVASGIILSLIELVHNSVKSSPLGEKAIGLLENIVSSSESALCEAASVGGAIRILVETIEDGSXTRGILFLICQSCREKYRGLILREGVMPGLLQLSIDGTRRAKNMARELLLLLRDYSDYSSRQKQMNHELIERIMEEIDADGEKLADAKLRLVEEMIAKLNT 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02925 322 PANTHER U BOX DOMAIN-CONTAINING 5 277 - -
Arst5g02925 322 SUPERFAMILY ARM repeat 5 300 IPR016024 -
Arst5g02925 322 Pfam Armadillo/beta-catenin-like repeat 113 150 IPR000225 GO:0005515
Arst5g02925 322 Pfam Armadillo/beta-catenin-like repeat 71 105 IPR000225 GO:0005515
Arst5g02925 322 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 198 IPR000225 GO:0005515
Arst5g02925 322 SMART arm_5 70 110 IPR000225 GO:0005515
Arst5g02925 322 SMART arm_5 152 194 IPR000225 GO:0005515
Arst5g02925 322 SMART arm_5 111 151 IPR000225 GO:0005515
Arst5g02925 322 SMART arm_5 28 68 IPR000225 GO:0005515
Arst5g02925 322 Gene3D - 3 318 IPR011989 -
Arst5g02925 322 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Arst5g02925 322 FunFam U-box domain-containing protein 4 3 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02925 Arst-Chr5 85009170 85011348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02925 3 275 U-box Gene Family AT2G23140 31.802 2.62e-25 104