Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02920 ATGAATAATTTGGAGGTGGTGAGGCCGCCAATTGAGAAGCCGGGGATTGCGGGAGAATATGATTTATCACGAAGATGTTGTAGAACACCTCTGTTGATAGATTGGCCAATCCTTGGCATGTTACCACAAGTCCTTAGCAACTTGTGCCATATCCATGATTTTGTAACTAATGTTTTGAGACAAAGAGGTGGCACCGGTGAATTCATGGGACCATGGTTCACCAAAATGAACTGCATGGTGACTAGTGACCCCATGAATGTTCATCACATAATGAGCAAGAGTTTTGACAACTATGTCAAGGGCGGCCCCGAGTTTCGCGAGATTTTCCAAGCTTTCGGAGACGGGATGGAGGATGTGAAGAAGCTAGTTTACCTACATGGTGCTCTATGTGAAGATTTGAGGCTGTTTCCACCTGTTCCTATTAAACGTAAACAATCATTGAAACGTGACACAACACTTCCTAGTGGTCATTGTGTTATTGATCCAAATACAATTATTTTGTTGTTTACTTATGCAATGGGAAGGTTTGAAGAGATTTGGGAAAAAGATTGCTTGGAGTTCAAACCAGATAGATGGATTTCAGAGAAAGGAGAAACAATACATGTTCCATCTTATAAGTTTTTTAGTTTTAACGCAGGTCCAAGGACATGCATGGGAAAAGACTTATCTTTTATTCAAATGAAAATGGTGGCATCTACTCTTTTGCGCAATTATCATGTACAAGTGGTGGAAAATCATCCTACTACCCCAGCTCATTCCACTGTGCTTTTTATGAAGCATGGCTTGAAGGTTATCATAACAAAAAGACAATTTTAA 816 0.4007 MNNLEVVRPPIEKPGIAGEYDLSRRCCRTPLLIDWPILGMLPQVLSNLCHIHDFVTNVLRQRGGTGEFMGPWFTKMNCMVTSDPMNVHHIMSKSFDNYVKGGPEFREIFQAFGDGMEDVKKLVYLHGALCEDLRLFPPVPIKRKQSLKRDTTLPSGHCVIDPNTIILLFTYAMGRFEEIWEKDCLEFKPDRWISEKGETIHVPSYKFFSFNAGPRTCMGKDLSFIQMKMVASTLLRNYHVQVVENHPTTPAHSTVLFMKHGLKVIITKRQF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02920 271 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 210 219 IPR017972 GO:0005506|GO:0016705
Arst5g02920 271 Pfam Cytochrome P450 107 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 PRINTS E-class P450 group IV signature 217 235 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 PRINTS E-class P450 group IV signature 122 138 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 PRINTS E-class P450 group IV signature 201 217 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 PRINTS E-class P450 group IV signature 175 193 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 Gene3D Cytochrome P450 115 270 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 Gene3D Cytochrome P450 25 114 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 SUPERFAMILY Cytochrome P450 34 115 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g02920 271 PANTHER CYTOCHROME P450 33 116 - -
Arst5g02920 271 SUPERFAMILY Cytochrome P450 107 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02920 Arst-Chr5 84807121 84811736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02920 117 269 Cytochrome P450 AT4G39490 56.863 1.71e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02920 - - adu:107489912 572.007