Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02907 ATGGCTAGAAGCTGGGTTATTGACATTGGAGGACTTGCAAAGAAAGTGAAGAATAATACATTGCCATTAGCTGATCAAATCAATGACTGTGGAGCATATTGTGAATGTCCAATATGTCATTATCACATTGATAACATTGATGTTTCTCCTGAGTGGCCAGGCTTTCCGGCCGGCGTGAAGTTTGATCCTTCCGACATAGAACTGTTAGAACATTTGGCAGCAAAATGTTGTGTTGGGAACAAAGTGCCTCATGCCTTTATCCAAGATTTCATCCCAACACTAGAAGGAGACCAAGGAATATGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGGCCAGTGTTCATTTCTTTCACAAAACAACTAATGCATATGCTACCGGACAACGAAAGCGTCGAAAGATTAATCATCAACTAGGCCTAAGTGAGGAGCATGTTCGCTGGCATAAGACCGGTAAGACCAAAGCTGTAACAGAAAATGGAGTACACAAGGGCTTCAAGAAGATCATGGTTCTTTACGTAAGGCCTAAGAGAGGAGCAAAGCCGAATAAATCGAAATGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGGTGAGAAGGAAGGTGAATATGTGGTTTCAAAGATTTTCTATCAGCAGCAGAAGAAAACTAAGAAGAATAAGCTGAATCCATTGGTGGCTGAAGATTCTGTCATGGCATTACAAGCAAGTCCAAGAACACCGAATCCAAATCCACCAAAACGGCCTCGGACAGGAAAATCTGTTGATTTTGAAGAAACTGACCTTATGCTATTCACTCAGGGTGGAAAGCCTACTATTCATGGAGAATCACTTGAACCACCACCATCTGAAGTTCATGGTGATGAAAATAATGGAGGCTTTAACAACACTGCATTGTTATCTGTTGAAACACAACCTGTCAACTCTGACTTTATTGGATTGGATGATATCTTACTATGCAAGGAACAGACATTAGATTCTTCTTCTGCTCACCTAAATGATTCGGGTTTGAAGTCCAACAATCTGAAAGGCTTTGCTTGCAATGCAAATGGAAATGCAGGTGAATTGTTTGGGGATGTGAATGATTGTTATGGAATTTCAGTGCTGGATAACCTGGGACTGGACAGTCCTCCCGATTTTGATCTTTCTAATTTGCAATTTTGTTCTCAAGACAATATCATTGACCTTCAATGGCTGGACAAACCATAA 1221 0.4111 MARSWVIDIGGLAKKVKNNTLPLADQINDCGAYCECPICHYHIDNIDVSPEWPGFPAGVKFDPSDIELLEHLAAKCCVGNKVPHAFIQDFIPTLEGDQGICYTHPENLPGAKKDGASVHFFHKTTNAYATGQRKRRKINHQLGLSEEHVRWHKTGKTKAVTENGVHKGFKKIMVLYVRPKRGAKPNKSKWVMHQYHLGSEEGEKEGEYVVSKIFYQQQKKTKKNKLNPLVAEDSVMALQASPRTPNPNPPKRPRTGKSVDFEETDLMLFTQGGKPTIHGESLEPPPSEVHGDENNGGFNNTALLSVETQPVNSDFIGLDDILLCKEQTLDSSSAHLNDSGLKSNNLKGFACNANGNAGELFGDVNDCYGISVLDNLGLDSPPDFDLSNLQFCSQDNIIDLQWLDKP 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02907 406 FunFam NAC domain-containing protein 8 64 220 - -
Arst5g02907 406 MobiDBLite consensus disorder prediction 238 258 - -
Arst5g02907 406 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Arst5g02907 406 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Arst5g02907 406 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Arst5g02907 406 Gene3D NAC domain 64 222 IPR036093 GO:0003677|GO:0006355
Arst5g02907 406 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 305 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02907 Arst-Chr5 84659475 84663923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02907 36 220 NAC Transcription Factor Family AT1G28470 53.684 2.64e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g02907 NAM 7e-20 No_clan