Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02892 ATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACAACATTTCCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAGTCCAGTTTCTGTTCTTGATCTGCAATTTTACAGTGAAGACCCACCTTCTCCAATCAAAAAGAAGACAGAAATCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTGATAACATAGGGCATGCATTGGACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATAAAGTTCTTTGGCAAAATGACGATAATGGCGAGAAATTCACCAATTGCAGAGAGAGAAAAGATTCTGACCGTAAATACATAGCAGAAATATTGCTCGCATCAGGGTTGCTCAGTAGCCCCAGCTTAATCCAGGCAGTTCATTCACCAGGTCACCTGATAAACCCAAAGTTGTTCTTTGCACTTGAACTATTGAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGCTGGGAAGATTCTTAGGATAAATAATCTTGAAGAAATGCAAAGAAAACTCATATTTGATGTTGTCAATGAGATTCTAGTACAAAAAATTAGTGTCTTAATATATGTATATTTTGGCTAA 723 0.3831 MDSHRDIEGTQADHSESNNNISIQQVTHMNQNTATKELSKESAMAMITVTSEQQSPVSVLDLQFYSEDPPSPIKKKTEISKDLDEALATPDNIGHALDLPLSFNNTKANFSNGTSDDDLQTQNLDKVLWQNDDNGEKFTNCRERKDSDRKYIAEILLASGLLSSPSLIQAVHSPGHLINPKLFFALELLKTNKLQFNMKHNAGKILRINNLEEMQRKLIFDVVNEILVQKISVLIYVYFG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02892 240 Pfam Domain of unknown function (DUF4378) 149 232 IPR025486 -
Arst5g02892 240 PANTHER LONGIFOLIA PROTEIN 2 232 IPR033334 GO:0051513
Arst5g02892 240 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02892 Arst-Chr5 84491519 84492490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02892 8 232 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 32.068 4.71e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02892 - - adu:107489896 471.855