Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02878 ATGGACCCACCACCGCCACCGCCACCGGCAGCCACGTCATCCAACGGCGCCAACAAGCTCCGCCTCATGTGCAGTCACGGCGGTCATTTCCTCCCCCGTCCACGCACCAACACTCTCTTCTACGCCGGCGGCGAGACACGCATCGTCTCCTTCCATCGCCACAATCCGCCACACTCTCCGTCGTGCCTCCGTTCAACATCAAGTACCACCTCCCACCTCACCTCCACCTCGACTCACTCATCTCTCTCTCTTCCGACGACGACCTTGCCGTACTCCTCGACGAGAACCGCCGCCTCAACTCCACTCCCTACCGCATCAGATTGTTCCTCTTCTTCTTCCACTCTTCTCCGCGTTCCGCCGCTGCAATTCGGCACCCGAAGACGGAGGCGTGGTTCTTCGACGCGCTTAAGAGTGCTAAGATTATGGAGCGTGATGCTCACGTGACCAGTCAGGAGTTTTGTTCCTCTGTGGCCGAGTCTATGGTTTTGGATACAACCTCATCTTTTGGCTCCACTTCTTCTTCAACTTCGTCGACGAATTTGCCTCCGTTGAGGGCTCAGGCTGATGAGAACAACAACAACGACGTCGTTTTGAAGGATAGCAAGGGGAAGTTGAATTCTTCGGATTCAATCTCGTGTGATAATACCGTTTCATCTAGTGTTATGTCCAATACATCTTACGAAGACCCTGCGGTTTATCATATTTCGGAGGCAAGAACCAATGCTGAATCCATTGAAGCTGAAAACAAACTCGCTTACATTTCCTCTGGGGTCATGGCGAATAACATGAATATGGATCTCGGGTATGCCTCATTTCCACAGTATAATCAAGTGGGGAATCCGCATTTGCAGTTTGTACAAGCTCCTCAGCAAATTCTACCAATCCACCCAAGTGGCCTGTTACCACTACCATCATGCCAACCAATGTACCAGCAACCGCAACCATTGCAGAATATGGTTTACTATCCTAATCAATCGTGTGCTGTATACCTTGTGCCTATTGGAAACATCCCTCCCAATGGTTTTCCTATAGCTGCTTCTGGCAAAGCTTCATTGAATCTGAATCCAGATCCTCCCTTAATGAATGTTCATGTAGCTTACAAACCTATGCGGGAAGCCAGGTCTCCTTTTGGCCATGATTTTGCCCCACCAGATTACTTAATAGACAATGCAATGACTGCATCTTCTACTCATGTAACTCAGCAACAAGACATGGATATTTATTCATTTTATCATCAATCTCCAAACGTATCTATCAATTCTGGGGAATCTCCCGAGTTTGAAAATGAACTTGATGATGGCCTTGCTCGTGATCAGATATACAAATCCCAGCCCCCTCCTCCGAAATACCCAACCATGTCAAAAGCTACAACAAACTTGTTATCTGAGGCTCTTGCTAAATTGCATGTGGATAACCTGAAGCAGCAGACAGAACAGTAG 1439 0.4851 MDPPPPPPPAATSSNGANKLRLMCSHGGHFLPRPRTNTLFYAGGETRIVSFHRHNLATISSFISHISATLSVVPPFNIKYHLPPHLHLDSLISLSSDDDLAVLLDENRRLNSTPYRIRLFLFFFHSSPRSAAAIRHPKTEAWFFDALKSAKIMERDAHVTSQEFCSSVAESMVLDTTSSFGSTSSSTSSTNLPPLRAQADENNNNDVVLKDSKGKLNSSDSISCDNTVSSSVMSNTSYEDPAVYHISEARTNAESIEAENKLAYISSGVMANNMNMDLGYASFPQYNQVGNPHLQFVQAPQQILPIHPSGLLPLPSCQPMYQQPQPLQNMVYYPNQSCAVYLVPIGNIPPNGFPIAASGKASLNLNPDPPLMNVHVAYKPMREARSPFGHDFAPPDYLIDNAMTASSTHVTQQQDMDIYSFYHQSPNVSINSGESPEFENELDDGLARDQIYKSQPPPPKYPTMSKATTNLLSEALAKLHVDNLKQQTEQ 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02878 490 MobiDBLite consensus disorder prediction 180 221 - -
Arst5g02878 490 CDD PB1_UP2 23 122 - -
Arst5g02878 490 PANTHER OS05G0427100 PROTEIN-RELATED 13 376 - -
Arst5g02878 490 MobiDBLite consensus disorder prediction 446 465 - -
Arst5g02878 490 SUPERFAMILY CAD & PB1 domains 37 129 - -
Arst5g02878 490 SMART PB1_new 34 124 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02878 Arst-Chr5 84226054 84228762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02878 13 122 MAP Kinase Kinase Kinase AT2G35050 36.607 9.00e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02878 - - aip:107644557 883.634