Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02841 ATGCCTCTGCAATCTTCCATCTCCTCCTTTTCCACCCATTCTTCTTCTTCTTCTTCCTTCGGCTATGCATGGGAGTATGATGTGTTTATTAGTTTCAGAGGCGAAGATACTCGCTATGGTTTCCCTGGCAACCTCTACAAAGCTCTTTTTGATAAAGGAGTCCACACCTTCATTGATGATGAGGAGCTTCAAAGAGGACACGAAATCACACCCTCACTTCTCAAGGCAATTGAAGAGTCCAGGATTGCCATCATTGTCCTCTCTCCTAACTATGCTTCTTCTTCTTTTTGCTTAGACGAGCTTGTCCACATCCTTCACTGCATCAAGGGAAATAATCGGTTGGTTTTGCCAGTTTTCTATGAGGTCGATCCTTCTGATGTTCGCCATCTAAAAAACAGTTTTGGAGAGGCAATAGCTAAGCATGAGAAGAGATACAAAGATGACATGAGCAACAAGGTGGACAAATGGAAACAGGCTCTGCAGCAAGTAGCTAATTTCTCAGGATATCATTTCAAACATGGGGATGGATATGAACATAAGTTTATTAGAAATATCGTGAAAGACATTTCAAGAAAGATTAGGCGTGTACCTTTGTCTGTTGTTCTTTTCCCTGTTGGACTAGATTATCGAGTGTCAAAAGTAATTTCATTTTTGAAAATAGATTCGAGTGATCAAGTTCACATGGTAGGGATTCATGGAGTTGGTGGAATAGGAAAAACATCACTTGCTTGTGCTGTTTATGACTTGATTGCTGACCATTTTGACGGTCTGTGCTTTCTTGCAAATGTAAGAGAAAACTCAAAGAGACATGGCTTGGTTTATCTTCAAAATATCCTTCTCTCTGAGATATTAGGAAAGGAGGAAATAAAGATAGTGAGTGTTCAACAAGGAACTTCTCAAATCCAACGAAGACTATGTCAAAAGAAAGTTCTTTTGATTTTAGATGACGTTGATGATCACAAGCAACTACAGGCTATTGCTGGAAAACCTGGCTGGTTTGGTCCTGGAAGCAGAGTTATTATTACAACACGAGACACACATTTGCTAAAATATCATGGTGTTGAAAACACACATGAGGTAGAGGGACTAAATGAGGCAGAGTCTTCTCAATTGCTTGTTAAACATGCATTTAAAAATGGTTATGTTAGCAACCCAAGTTATGCAGATGTTTTGACCCGTACAATAACTTATGCTTCTGGTCTTCCATTGGCTTTGGAAGTAATAGGTAGTCACTTGTGTGAAAAAAAAGTAGAAGAATGGGAATCTGCATTGAATAAATTTGAAAGACATCTTGACAATAACATACATGAGATACTTCGAGTAAGTTTTGATGCTTTGGGAAAAGAAGAGCATAGTGTTTTTCTTGATATTGCCTGTTGTTTCAAAGGATATGAATTAAAGGAAGTTACAGATCTACTTCAAGCTCATTATGGAAGTTGCATGAAATATCATATTGGAATGTTGGTTGAAAAATCTCTCATAAAGATCAATTTGTATAATCTCAGTGTGACAATGCATTCTTTGATAGAGAACATGGGCAAAGAAATTGTAGTAAAAGAATCACCTGAAATGCCTGGAAAGCGTAGCAGGTTATGGTTCTCCGAAGATATAATTAAAGTTTTACAAGATAATCTAGTAAGTGTTGGTTATTGTCTCTGA 1659 0.3773 MPLQSSISSFSTHSSSSSSFGYAWEYDVFISFRGEDTRYGFPGNLYKALFDKGVHTFIDDEELQRGHEITPSLLKAIEESRIAIIVLSPNYASSSFCLDELVHILHCIKGNNRLVLPVFYEVDPSDVRHLKNSFGEAIAKHEKRYKDDMSNKVDKWKQALQQVANFSGYHFKHGDGYEHKFIRNIVKDISRKIRRVPLSVVLFPVGLDYRVSKVISFLKIDSSDQVHMVGIHGVGGIGKTSLACAVYDLIADHFDGLCFLANVRENSKRHGLVYLQNILLSEILGKEEIKIVSVQQGTSQIQRRLCQKKVLLILDDVDDHKQLQAIAGKPGWFGPGSRVIITTRDTHLLKYHGVENTHEVEGLNEAESSQLLVKHAFKNGYVSNPSYADVLTRTITYASGLPLALEVIGSHLCEKKVEEWESALNKFERHLDNNIHEILRVSFDALGKEEHSVFLDIACCFKGYELKEVTDLLQAHYGSCMKYHIGMLVEKSLIKINLYNLSVTMHSLIENMGKEIVVKESPEMPGKRSRLWFSEDIIKVLQDNLVSVGYCL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02841 552 PRINTS Disease resistance protein signature 228 243 - -
Arst5g02841 552 PRINTS Disease resistance protein signature 398 412 - -
Arst5g02841 552 PRINTS Disease resistance protein signature 304 318 - -
Arst5g02841 552 Gene3D - 198 358 IPR027417 -
Arst5g02841 552 Gene3D - 21 197 IPR035897 -
Arst5g02841 552 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 169 IPR035897 -
Arst5g02841 552 ProSiteProfiles TIR domain profile. 24 193 IPR000157 GO:0007165
Arst5g02841 552 FunFam Disease resistance protein (TIR-NBS-LRR class) 22 195 - -
Arst5g02841 552 SMART till_3 25 166 IPR000157 GO:0007165
Arst5g02841 552 Pfam TIR domain 26 193 IPR000157 GO:0007165
Arst5g02841 552 SUPERFAMILY "Winged helix" DNA-binding domain 434 542 IPR036390 -
Arst5g02841 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 457 IPR027417 -
Arst5g02841 552 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 541 IPR044974 GO:0006952
Arst5g02841 552 Gene3D - 362 447 IPR042197 -
Arst5g02841 552 Pfam NB-ARC domain 209 437 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02841 Arst-Chr5 83850700 83853066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02841 20 541 WRKY Transcription Factor Family AT4G12020 29.356 8.95e-50 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02841 - - aip:107644584 926.391