Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02840 ATGCCTCTGCAATCTTCCTTCTCCTCCTTTTCCACCCATTCTTCTTCTTCTTCTTCCTTCGGCTATGCATGGGAGTATGATGTGTTTATTAGTTTCAGAGGCGAAGATACTCGCTATGGTTTCACTGGCAACCTCTACAAAGCTCTTTTTGATAAAGGAGTCCACACCTTCATTGATGATGAGGAGCTTCAAAGAGGACACGAAATCACACCCTCACTTCTCACCACAATTGAAGAGTCCAGGATTGCCATCATTGTCCTCTCTGCTAACTATGCTTCTTCTTCTTTTTGCTTAGACGAGCTTGTCCACATCCTTCACTGCATCAAGGGAAATGATCGCCTGGTTTTACCGGTTTTCTATGAGGTTGATCCTTCTGATGTGCGCCATCAAAGAAATAGTTTTGGAGAGGCAATAGCTAAGCATGAGAAGAGATACAAATATGACATGAGCAACAAGGTGGACAAATGGAAGCAGGCTCTGCATCAAGTTGCTAATTTGTCAGGATATCATTTCAAACACGGGGATGGATATGAACACAAGTTTATTGCAAATATCGTGGAAGAAATTTCAAGAAAGATTAATCGTGTACCTTTGCCCGTTGCTGATTACCCTGTTGGACTAAAGTCTCGAGTGTCAAATATAATTTCACTTCTGGAAATGGATTCTAGTGATCGAGTTCACATGGTAGGGATACATGGAATTGGTGGCATAGGAAAAACGACACTTGCAATTGCTGTCTATAACTTGATAGCTGACAACTTTGAAAGTGTGTGCTTTCTTGAAAATGTGAGGGAAAATTCAAGTAAATATGGGTTGGTACATCTTCAAAATAACCTTCTTTGTAAGATACTAGGGAAGGAGGGAGTCCAGATACAAGGTGTTAAAGAAGGAACCTTACAAATACAACAAAGACTTTGTCGAAAGAAAGTTCTTTTGATTCTAGATGATGTTGATGATAAAAAGCAGTTAGAATCTATTGCTGGAAAACCGGATTGGTTTGGTGGTGGTAGCAGGGTGATTATTACAACACGAGATACACATTTGCTAAAACTCCATAATGTTGAAAAGACATTTGAGGTAGCTGCTTTGAGTAAGGAACATTCTCTTGAATTGCTTGTTAAAAAAGCTTTCAAAAATGATGAAGTCAACTCAAGTTATTATGCGAATGTTTTAAATTGTGCAATAACTTATGCCTCTGGACATCCGTTGGCTTTGGAAATAATAGGTTCCAATTTGTTTGGAAAAGAAGTAGAACATTGGGAATCTGCATTACATCAGTATGAAAAAATTCCTAACAGGGAGATCCAACAAATACTTAAAATAAGTTATGATGCTTTGGAGGAATATGAGAAGAATATTTTTCTTGATATCACTTGTTGCTTTAAAGGACACAACTTGAAAGAAATTAGTGATATACTTCATGCTCATTATGGAGATCACATGACCTATCATATTGATCGGTTGGTTGATAAATCACTCATAAAGATTAAGTTTGGGGATCAAGTGACATTTCATGATTTGATAGAGGATATGGGCAAAGAAATTGTTCGACAAGAATCACCAAATATGCCAGGAAACCGTAGCAGGTTATGGTCTCATGAAGATATAGTTCAAGTTTTACAAGAAAAACAAGGGACTAGCACCGTTGAGATTATATATCTGGAATTTCCTTCCTCAAAAATGGAGGAAAATGGTGATCCATCGAAAAAGAAGAAAAATAAAGTTGTACAAGTGGAATGGGATGGACTAGCGTTTAAGGATATGGTAAATCTGAAGACACTTATCATAAAAAATGGTTCTTTTTCCAAAGGTCCCAAATATCTTCCAAACAATTTAAGAGTATTGGATTGGAGGAGGTCTCCATTGAAGGGTTTTCCAGATGATTTTCAACCAAAGCACCTCTGCATGCTCAAGTTACCCGACTATCTTTTTAAGTCATGCAATTTGCCTAAGCACTCTAGTGGTCATCCAAAGAAGCTCTCTATACTCAAGTTACCCTATTATCTCTTTAAGAAGTCATACAAGTTGGATAGCTTATTCAAGAACTTGGCCTCCTTGAATGTTTTGAATTTTGACAACAGTGAATATTTGAAAGAGATACCTGATGTGTCCGGTCTTCTAACTTTACAAAAATTATCATTCAGTGGTTGTAAGAATTTGATTAGAGTTCACAATTCAGTTGGTATCCTCAATAATCTTAAAGTCTTGAAAGCTGAAGATTGCCAGAGTCTTAGGACTTTTCCATCTATCAATTTGCCCTCACTTGAAATACTTATGTTGTCTGGTTGCAATAGACTTGAGAAATTCCCAGAAATACTAGGAAAGATGGAAAAGGTAGAAATGCTTCGTTTGTGTGGCACTAACATAAAACATTTGCCATCGTCATTTCAAAACCTTTGTGAGTTGTCCCATTTGATTCTGATTGCCAATACCTTTCATAGGATACCAAGTGTGATTCTGGATATGCCAAAACTGTTTACATTATTATATATTAATGTAAACATAAACAACCATGAGACTTGGGCATCACGCAACAAGTTGGAAGAGGGGGTTGAAGGAACACTCAGCTCTTCAAATGTGAGTAATCTTACTGTCAATAACTATATGCTGTCAGATAACTTTTTTCCACTGGCACTTGCATGGTTTCGCAATGTGAAAACATTAGACCTGAGTCGCAACAGGTTCACAATCCTTCCCGAATGCATCCAAGATTTTCGCTTTCTAAGCTCCCTCAAAGTTGATTTTTGCACGAAGCTAGTTAAGATTGCAGGAATTCCACCAAATTTGAAACAATTCTCGGCAGTAGGCTGCAGCAACTTGACTGAGGAGGAGGTCAAAAGCGTGTTACTCAATCAGGAACTGCACGAGAATGGAAGAACCGAGTTCGCATTGCCAGGAACAACGATTCCAGCATGGTTTGAAGAGCAGGGAAAGGGAGATTCTATTTCATTCTGGTTTCGTGGCGAGTTCCCTTCGAATGCACTTTGCTTTGCAATTCTACAGCGGAATAGGCGCAATGGTGGAACTTATATAACTCGTATAACAACCATGGTGAGCATCAATGGCAAGCAAGTTTCCCGTGGAGGTGGGAGAACCCAAATGCAGGACCTATTTATTTTTGATCTGTCCGTGACAAATAAAACGTATCATTTGGATGGAATATGCTTTGAAAATAAATGGAATCATGCGAATGTTTCATTTGAATTTCAATATGGCGGCGAAATGGAGTTTGGAATGCATATATTGAAGCAAGAGAGTAGTAGCATCATGAAAGATATTCAATTCACTAATTGTAACAGTCCAGACCACCTACCAGCACGATATTGTCCACTTTGGCACAGTAACAGCCCGGACCACAAAAGGAAAAGGCCGCACAAAGCCCTCCACACTCACTCATCAAAATGCACACATCATGTTTAG 3420 0.3854 MPLQSSFSSFSTHSSSSSSFGYAWEYDVFISFRGEDTRYGFTGNLYKALFDKGVHTFIDDEELQRGHEITPSLLTTIEESRIAIIVLSANYASSSFCLDELVHILHCIKGNDRLVLPVFYEVDPSDVRHQRNSFGEAIAKHEKRYKYDMSNKVDKWKQALHQVANLSGYHFKHGDGYEHKFIANIVEEISRKINRVPLPVADYPVGLKSRVSNIISLLEMDSSDRVHMVGIHGIGGIGKTTLAIAVYNLIADNFESVCFLENVRENSSKYGLVHLQNNLLCKILGKEGVQIQGVKEGTLQIQQRLCRKKVLLILDDVDDKKQLESIAGKPDWFGGGSRVIITTRDTHLLKLHNVEKTFEVAALSKEHSLELLVKKAFKNDEVNSSYYANVLNCAITYASGHPLALEIIGSNLFGKEVEHWESALHQYEKIPNREIQQILKISYDALEEYEKNIFLDITCCFKGHNLKEISDILHAHYGDHMTYHIDRLVDKSLIKIKFGDQVTFHDLIEDMGKEIVRQESPNMPGNRSRLWSHEDIVQVLQEKQGTSTVEIIYLEFPSSKMEENGDPSKKKKNKVVQVEWDGLAFKDMVNLKTLIIKNGSFSKGPKYLPNNLRVLDWRRSPLKGFPDDFQPKHLCMLKLPDYLFKSCNLPKHSSGHPKKLSILKLPYYLFKKSYKLDSLFKNLASLNVLNFDNSEYLKEIPDVSGLLTLQKLSFSGCKNLIRVHNSVGILNNLKVLKAEDCQSLRTFPSINLPSLEILMLSGCNRLEKFPEILGKMEKVEMLRLCGTNIKHLPSSFQNLCELSHLILIANTFHRIPSVILDMPKLFTLLYINVNINNHETWASRNKLEEGVEGTLSSSNVSNLTVNNYMLSDNFFPLALAWFRNVKTLDLSRNRFTILPECIQDFRFLSSLKVDFCTKLVKIAGIPPNLKQFSAVGCSNLTEEEVKSVLLNQELHENGRTEFALPGTTIPAWFEEQGKGDSISFWFRGEFPSNALCFAILQRNRRNGGTYITRITTMVSINGKQVSRGGGRTQMQDLFIFDLSVTNKTYHLDGICFENKWNHANVSFEFQYGGEMEFGMHILKQESSSIMKDIQFTNCNSPDHLPARYCPLWHSNSPDHKRKRPHKALHTHSSKCTHHV 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02840 1139 Gene3D Ribonuclease Inhibitor 768 952 IPR032675 -
Arst5g02840 1139 Pfam NB-ARC domain 213 446 IPR002182 GO:0043531
Arst5g02840 1139 PRINTS Disease resistance protein signature 750 766 - -
Arst5g02840 1139 PRINTS Disease resistance protein signature 304 318 - -
Arst5g02840 1139 PRINTS Disease resistance protein signature 398 412 - -
Arst5g02840 1139 PRINTS Disease resistance protein signature 228 243 - -
Arst5g02840 1139 Gene3D - 22 190 IPR035897 -
Arst5g02840 1139 SMART LRR_typ_2 799 822 IPR003591 -
Arst5g02840 1139 SMART LRR_typ_2 776 798 IPR003591 -
Arst5g02840 1139 SMART LRR_typ_2 752 775 IPR003591 -
Arst5g02840 1139 SMART LRR_typ_2 882 904 IPR003591 -
Arst5g02840 1139 SUPERFAMILY L domain-like 517 942 - -
Arst5g02840 1139 Gene3D - 191 358 IPR027417 -
Arst5g02840 1139 ProSiteProfiles TIR domain profile. 24 193 IPR000157 GO:0007165
Arst5g02840 1139 Pfam TIR domain 26 194 IPR000157 GO:0007165
Arst5g02840 1139 Gene3D - 362 447 IPR042197 -
Arst5g02840 1139 Gene3D Ribonuclease Inhibitor 571 767 IPR032675 -
Arst5g02840 1139 SMART till_3 25 166 IPR000157 GO:0007165
Arst5g02840 1139 MobiDBLite consensus disorder prediction 1115 1139 - -
Arst5g02840 1139 MobiDBLite consensus disorder prediction 1118 1139 - -
Arst5g02840 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 457 IPR027417 -
Arst5g02840 1139 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 780 IPR044974 GO:0006952
Arst5g02840 1139 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 169 IPR035897 -
Arst5g02840 1139 FunFam Disease resistance protein (TIR-NBS-LRR class) 22 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02840 Arst-Chr5 83837723 83842773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02840 20 828 WRKY Transcription Factor Family AT4G12020 29.298 5.55e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02840 - - aip:107644584 1193.33