Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02790 ATGGATTTGAGCTCTAAATCCTACAAATGGAAGTATGATGTATTCTTGAGCTTTAGAGGGGATGATACACGTAGGAGTTTCACAAGCCATCTTTATCATTCTCTTTGCCAAAAGGGTGTCAATACTTTCATAGACTACAAGGATCTCATAAAGGGAGAGCAGATAACACCTTCACTTCTTAGGGCTATTGAAGCCTCAAGGATCTCAGTCGTTGTATTATCTGAAAACTATGCATCTTCCACTTCTTGCTTGGATGAACTCCTTAAGATCATTGAGTGCAAGGACACTAAGGGTCAGCTGGTTTTGCCGGTCTTTTATGGTGTGAATCCATCTCAAGTAAGAGAACAGAAGGGAAGTTTTGCAGAAGATTTGGCCAAACATGAAGACAAGTTCAGGGATGATGTCAACAAAGTAAAAAGGTGGAGGGCAGCACTATGTGAGGCTTCTACTTTGTCTGGGTGGCACATGGGTGACGGGCAAGAATCAAAATTTGTCCAGAGAATTGTTGAGGAGATATTGAGTAAGTTGAACCGCACACCTTTCAATGTTGCTAAGCATCCTGTTGGATTGGATTCACCTATTGAAGATATTAAAACACTTTTAGATACTGGATCAGATGATGTACAGGCTATAGGAATTTATGGAATTGGAGGTATAGGGAAAACAACACTTGCTAAGGCTGTTTATAACCATATTGCTAACCAGTTTGAGGGTAGTGCTTTCATTGCAAATGTTAGAGAAATTTCAAGTCAAAGATCTGGGTTAGTTCAACTACAAGAAGCTCTTCTTTCTGAGAATTTGAACCACAGATATTGTAAAGTAGGAAACAAAGACAGAGGCATTAATATGATAAAGAATAGGCTTTGCAGCAAAAAAGTTCTCATAGTTGTTGATGATGCTGATTCGTTGGAGCAACTGGAATCATTGATTGGAGAATATAGTTGGTTTGGTTCTGGAAGTAGAATCATCATAACAACTAGAGATGAGCATTTGCTAGTTGCTCACAATGTGGAAACAATCTACAAGGTCAACGAATTAAATCATGGTCATGCTCTTGAACTTTTTAGTTGGTTTGCATTCAAAAATCCATGTCCTCCAACAAATTATGAGAAGCTTTCATCCCACATATTAAACTATGCCAAGGGACTGCCATTGGCACTAACAGTTTTGGGATCTCACTTTTGTGGTAGGGGAAAGGCTGAGTGGATAAGTGCATTAGCTAAACTGAAAAAAGCTCCAAATAAACAGATTTTTGAAATACTTAAAATCAGCTTTGATGGATTGGAAGAGAATGAAAAGGCCATTTTTCTTGATATTGCATGCTTCTTTAAGGGAGAGGACAGACAATATGTGAAAATGATATTAGATGGCTGTGACCTACATTCAGATAATGGTTTCGGAGTTCTAATGGAGAAGTCTCTAATTACTGTAGAAGTTAATAAGATTTGGGTGCATGATTTGCTACAGGAAATGGCTAAAGAAATTGTGCGTCTTGAATCCCCCAATGATCCTAGTAAACGTAGCAGATTATGGTTTCATGAGGATGTTCTTCATGTATTAAAACACAATAAGGGAAGTAACAACATTGAAGGCATAAGGCTAGATATACCAGAATCAGAGACAGACTACATAGAGGCCAAGGCCTTGTCAAGGATGAATAGACTCAGAATTCTTATTATCAACAATGTGCATGTTACAGATGATATCCAGTATCTACCTGATGAGCTAAGAATTCTTATTATCAACAATATGCATGTTACAGATGATATCCAGTATCTACCTGATACGCTAAGATTGATTAATTGGCCAAGATACCCTTCTTCAACTCTACCACCAAATTTCTATCCAAGGAGGCTTGTCTGTCTAAATATGAGTCATAGCCGCATCAAGCAGTTGTGGAAGGGAGTTAAGATATTCAGAGACTTGAAACTTGTGTCTTTTAGCAGCTGTGAACACCTCAAAGAAATTCCAGACTTCTCAATGGTTCCAAACCTAGAAAGCCTAAGCCTAGACAACTGTAGAAGCTTAATTAAGGTGCATGTGTCTGTGGGAACTCTTGATAAGCTTGTTACTTTAAACCTTCTATTTTGCTCCAATCTCAAGACCTTTCCAAGTCGTTTCATGCTAAAATCACTCCGTACTCTCCTCCTCACTGGCTGCTCAAAACTAAAAAAGTTTCCAGAGATTGTGGGGAACATGGAACATCTTGAAGAAATCCTTCTCCAAAGAACAGCAATAAAAGAACTACCTGAGTCGATTGAATATCTAAGCGGGCTGAAGTTCTTATTCTTAGAGTCTTGCCAGAGTCTTGAGCATCTCCCTAGTAGCCTTCAGAAGTTGCAAAACCTTACTACTCTTGATCTAAGTGGCTGCTCTAAGCTTCAAAAGATTCCGAAGCTACCCCCAAATACAAGATATATAGACTTGAGTAATTGTAGATCTTTGACAAGCTTTCCAACATTATCCAGCATATCAAATTTTATTGCAGAGGATTTTCCAAGGTTTTATCAAATTAGATTTGTTAACTGCCATAAACTGATAAATAAACAAGTCCTAGAGCATATAACAAATCTCTTCGGTAGTAAGGTTGTTTCACAATGCCCACACTCTCTTTGTATGTTTGTGTGTTATTCCTGCAAAATATTTCAGACATAA 2655 0.3808 MDLSSKSYKWKYDVFLSFRGDDTRRSFTSHLYHSLCQKGVNTFIDYKDLIKGEQITPSLLRAIEASRISVVVLSENYASSTSCLDELLKIIECKDTKGQLVLPVFYGVNPSQVREQKGSFAEDLAKHEDKFRDDVNKVKRWRAALCEASTLSGWHMGDGQESKFVQRIVEEILSKLNRTPFNVAKHPVGLDSPIEDIKTLLDTGSDDVQAIGIYGIGGIGKTTLAKAVYNHIANQFEGSAFIANVREISSQRSGLVQLQEALLSENLNHRYCKVGNKDRGINMIKNRLCSKKVLIVVDDADSLEQLESLIGEYSWFGSGSRIIITTRDEHLLVAHNVETIYKVNELNHGHALELFSWFAFKNPCPPTNYEKLSSHILNYAKGLPLALTVLGSHFCGRGKAEWISALAKLKKAPNKQIFEILKISFDGLEENEKAIFLDIACFFKGEDRQYVKMILDGCDLHSDNGFGVLMEKSLITVEVNKIWVHDLLQEMAKEIVRLESPNDPSKRSRLWFHEDVLHVLKHNKGSNNIEGIRLDIPESETDYIEAKALSRMNRLRILIINNVHVTDDIQYLPDELRILIINNMHVTDDIQYLPDTLRLINWPRYPSSTLPPNFYPRRLVCLNMSHSRIKQLWKGVKIFRDLKLVSFSSCEHLKEIPDFSMVPNLESLSLDNCRSLIKVHVSVGTLDKLVTLNLLFCSNLKTFPSRFMLKSLRTLLLTGCSKLKKFPEIVGNMEHLEEILLQRTAIKELPESIEYLSGLKFLFLESCQSLEHLPSSLQKLQNLTTLDLSGCSKLQKIPKLPPNTRYIDLSNCRSLTSFPTLSSISNFIAEDFPRFYQIRFVNCHKLINKQVLEHITNLFGSKVVSQCPHSLCMFVCYSCKIFQT 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02790 884 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 814 IPR044974 GO:0006952
Arst5g02790 884 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Arst5g02790 884 PRINTS Disease resistance protein signature 778 794 - -
Arst5g02790 884 PRINTS Disease resistance protein signature 380 394 - -
Arst5g02790 884 PRINTS Disease resistance protein signature 210 225 - -
Arst5g02790 884 PRINTS Disease resistance protein signature 287 301 - -
Arst5g02790 884 Gene3D - 175 341 IPR027417 -
Arst5g02790 884 SMART till_3 11 151 IPR000157 GO:0007165
Arst5g02790 884 Gene3D - 345 429 IPR042197 -
Arst5g02790 884 Gene3D Ribonuclease Inhibitor 708 869 IPR032675 -
Arst5g02790 884 SUPERFAMILY "Winged helix" DNA-binding domain 416 521 IPR036390 -
Arst5g02790 884 Gene3D - 8 174 IPR035897 -
Arst5g02790 884 SUPERFAMILY L domain-like 548 880 - -
Arst5g02790 884 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 178 - -
Arst5g02790 884 Pfam NB-ARC domain 193 417 IPR002182 GO:0043531
Arst5g02790 884 Pfam TIR domain 11 180 IPR000157 GO:0007165
Arst5g02790 884 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Arst5g02790 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 439 IPR027417 -
Arst5g02790 884 Gene3D Ribonuclease Inhibitor 519 707 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02790 Arst-Chr5 83107060 83110816 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02790 12 831 WRKY Transcription Factor Family AT4G12020 32.854 1.67e-112 377