Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02783 ATGTTACCTGTTGTTGCTGATTACCCAGTCAGACCAGAGTCCCAAGTGCAAGCTTCCTTTGATTCAGCATCATCTTTTTCTGTCTTAAGGCAATACCAATACCATGTGTTTCTCAGCTTCAGAGGCTGTGATACTCGCTATCGTTTCACTGGCAGTCTCTTCAAAGCTCTCCGCGACAACAAAATCCACACCTTCATGGATGATGTAGGTCTTCACAGAGGGAATGATATATCAAGAACACTTGTTGAGGCAATTAAAGGCTCCAGGATTGCCATCATTGTGTTCTCTGAGAACTATGCTGATTCTACTTACTGCTTAGATGAACTTGTCAAGATCTTGGAGTGCCATGAGTCTGATGACCAGTTTGTTTTGCCAGTTTTCTATGAGGTAGATACCAATGACGTGCGACGACAGACAGGTAGTTATGGGGAAGCAATGGCTAAACACGAGGAAAAGTTCAAGGATGACAAATCAAAAGTCGAAAAATGGAAGCGTGCTTTGCATGAAGCAGCTAACTTTACTGGCTTTTGTTTCAAAGGAAAAAAATATGAACATGAGTTTATTGCGAAGATTGTTGGAGTGGTGTCAAAGGAGATTAAACGTGTTGCTTTACCTGTTGCTGACTATCCAATTGGACTAGAGTCTCAAGTGTCGAAAGTAAAATCGCTTATATTCTCTGATGGCTATGATGGTGTCCACATGATAGGGATTCATGGAAATGGTGGATCAGGAAAAACAACAATAGCTCATGCAATTTATCATTTGATTGCTAATGGTTTTGAAAGTATATGTTTTCTGGAAAATGTGAGAGAAAATTCATATAAGCATGGTTTAGTACATCTTCAAGATATACTTCTTTCCAACATATTCGAAAGGAAGAATCTCAAATCAACAAGCGTTGAACAAGGAATTTCAAATATAAAGCACTGGCTCCAACAAAAGAAGATCCTTTTGATTCTAGATGATGTTGACAAGATAGAGCAGTTACAAGCTCTTGCTGGAAAGCCTGATTGGTTCGGCCGTGGAACTAGAGTCATCATTACGACACGAGATAAAGATTTGCTAGTATGCCATGGCATTCAAAGAATATATCAGCTGGAGAATTCAAATCCGGAGTCAAATATCACTGCATCTGCAAGAAAAGACAACACAGAACAAGTGGTTGAAAAAATCATCGGTGGCCAAGTCAATGGTTCATTAGAGCCTCTATTTTCAGAAGATACTAATGTTGATAGAAGCAAACAAGTGTCGGTTATTCAAGCTCAATCAAATGCACAAGTCATATGTCAGTTTAATGAAAACCAAGCAGAGTTTTGTCATACATGTTCTCTAGAAAGAATAGAAAGTGCCAACATCACTTTGAAAGTGAAGGAGGAACTTGAAGTTAAAGACTTGTCTTTGTGTGCTAAGTTGGCATCTTTGGAGGAAAAGAAAAGAGAACTTGAAGAGCAAATTCGTGCAGTAAAAGCTGAGATTTCAGATTCTACAGCAGAGAGACAGTTGCTAAGAGAAAAAGAGTTGGCAATGGAAAAAAGCTGA 1539 0.3899 MLPVVADYPVRPESQVQASFDSASSFSVLRQYQYHVFLSFRGCDTRYRFTGSLFKALRDNKIHTFMDDVGLHRGNDISRTLVEAIKGSRIAIIVFSENYADSTYCLDELVKILECHESDDQFVLPVFYEVDTNDVRRQTGSYGEAMAKHEEKFKDDKSKVEKWKRALHEAANFTGFCFKGKKYEHEFIAKIVGVVSKEIKRVALPVADYPIGLESQVSKVKSLIFSDGYDGVHMIGIHGNGGSGKTTIAHAIYHLIANGFESICFLENVRENSYKHGLVHLQDILLSNIFERKNLKSTSVEQGISNIKHWLQQKKILLILDDVDKIEQLQALAGKPDWFGRGTRVIITTRDKDLLVCHGIQRIYQLENSNPESNITASARKDNTEQVVEKIIGGQVNGSLEPLFSEDTNVDRSKQVSVIQAQSNAQVICQFNENQAEFCHTCSLERIESANITLKVKEELEVKDLSLCAKLASLEEKKRELEEQIRAVKAEISDSTAERQLLREKELAMEKS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02783 512 Pfam TIR domain 33 197 IPR000157 GO:0007165
Arst5g02783 512 Gene3D - 31 196 IPR035897 -
Arst5g02783 512 SMART AAA_5 231 372 IPR003593 GO:0016887
Arst5g02783 512 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 176 IPR035897 -
Arst5g02783 512 ProSiteProfiles TIR domain profile. 32 199 IPR000157 GO:0007165
Arst5g02783 512 Coils Coil 464 505 - -
Arst5g02783 512 FunFam Disease resistance protein (TIR-NBS-LRR class) 30 201 - -
Arst5g02783 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 372 IPR027417 -
Arst5g02783 512 PRINTS Disease resistance protein signature 310 324 - -
Arst5g02783 512 PRINTS Disease resistance protein signature 234 249 - -
Arst5g02783 512 SMART till_3 33 173 IPR000157 GO:0007165
Arst5g02783 512 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 370 IPR044974 GO:0006952
Arst5g02783 512 Pfam NB-ARC domain 214 354 IPR002182 GO:0043531
Arst5g02783 512 Coils Coil 146 166 - -
Arst5g02783 512 Gene3D - 197 361 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02783 Arst-Chr5 83042213 83044963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02783 82 367 WRKY Transcription Factor Family AT4G12020 30.584 8.13e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02783 - - adu:107489825 1013.83