Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02771 ATGGAACAAAAATCGTGCGAGGAATCTGCGAGAAGCGTTTCGGACTTGAAGTGTGCGAAGAATCTCAACGAATCCGATGAATCAATTGCATGCCCTACACCAAATAAGACGAATGAACCCTTACCTTCCAAATCCAAAGAGCAACAAACTCAGCTCCCAGAAAAATACAGAGCCGTAGCTGATTTGTTTGGCCATATGAGCTGCTCACTTAGATTGCTGCATCTGCGTAAAAAGTCTCCAACTTTTCAAAATATTTGTGCCCAAGTTGAAATTCTGGCGCAGAGGAAATTCTCATATGCCCATCTTGCACAAATGAAGTATATACTTCCTGAGGGCATACATATAGATAAGGTCCTTGTTCATGATAAGAAGAGCTTGTGTATGAAGTCAGACATGAAGATCACCTTGGTATTTGATTTTTTGGAAGAGGAATCTAATGAATCTGCTGATATGGCTCTTCGACAATATTTTAGTTCTAGGCTTATTAATTTCTCCAATATGCATCCCGAGGCTGCTGATATTCCAGAGGCTGTTCTGCCAGAGCCCTTTGGCCAAAGACCATGTGGCGTGATTGATGTAGATTTGCCTGTAAATTCTTCCAAAGCTTTTTCGTCAACTTCCAATCAAATTGAATTGTTGCCTGGGAAGTTCCATCTATGTCCATCCTTTAGCCGACACTTTTCTCAAAAGAATGTTGCTAGCCAAACCGAAAAGCTCCAGTGTTTTTCAACAACTAAAGCTTCCTTGTCATCCTGTGCATCTGGTTGCCAGGATAACCAAGAAAGCAAATATGCACCACCATCTGATTGTGCAACTAATATGAAAACTGGAGGACAGGGGAAGGAATCTCTCTCTCACTTTCAACCTAATATTGCTAATACACCAGTGCATACTGTCTGTCCTCCACATGATGTTTGTGATAGTAGTTTTGAGAGCCCTGATATCAAAATTTCCTCTTCCTCAAATAGTTTGATGACGGAGACACCTGCACAATCAGCACCTGGGAGATTGATTCCCATTTCTGATGCCAAGCTTCATAACATGGATACCCGAAAGTCAGCATCATGTCGCAAACCAGCAAAAAGAGTGCTTGACTTTCCACTCATGGAAGGAAATGATGGTTTTGACATCAAAGTAGACAACTTAGAACCTACCGGAGGTTCACACAAATACGATAGCATCCTCGAATCTAGTATTGCATGTGCTGAGGATTGGAATGTACTGCCCCAGCAGGTAGAAGAGAGGTCTGGTCACTCTCGTGAGGATACCAACCAAATTCAAGGTGGTTTAGATACAAGGGATCAAAAATCATCTTCGTTGCTTGATCTGGTCAATGTGATTCACTCTATATTTCATTCTGTCAGAGGAGCTTCAATCACGAAAGAGGAGTTTTTGCAAAAGATACTTATGAACAGTTTGGATGTTGTTGAGATTAGTGAAGTTGAAGAACAAATCAATTTTCTTGAAAAGTTGGTGCCAGACTGGATCTGCAGGAAGTTGCTTCCTAGTGGAGATGATATCTACAGCATCAAGAAAGTGTCAGATTTGGACTCAGTTCGATCTAGGCTTCTTGCCAACGTGACTCGGAGCTGA 1593 0.4168 MEQKSCEESARSVSDLKCAKNLNESDESIACPTPNKTNEPLPSKSKEQQTQLPEKYRAVADLFGHMSCSLRLLHLRKKSPTFQNICAQVEILAQRKFSYAHLAQMKYILPEGIHIDKVLVHDKKSLCMKSDMKITLVFDFLEEESNESADMALRQYFSSRLINFSNMHPEAADIPEAVLPEPFGQRPCGVIDVDLPVNSSKAFSSTSNQIELLPGKFHLCPSFSRHFSQKNVASQTEKLQCFSTTKASLSSCASGCQDNQESKYAPPSDCATNMKTGGQGKESLSHFQPNIANTPVHTVCPPHDVCDSSFESPDIKISSSSNSLMTETPAQSAPGRLIPISDAKLHNMDTRKSASCRKPAKRVLDFPLMEGNDGFDIKVDNLEPTGGSHKYDSILESSIACAEDWNVLPQQVEERSGHSREDTNQIQGGLDTRDQKSSSLLDLVNVIHSIFHSVRGASITKEEFLQKILMNSLDVVEISEVEEQINFLEKLVPDWICRKLLPSGDDIYSIKKVSDLDSVRSRLLANVTRS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02771 530 MobiDBLite consensus disorder prediction 26 49 - -
Arst5g02771 530 MobiDBLite consensus disorder prediction 26 50 - -
Arst5g02771 530 Gene3D - 429 529 IPR038090 -
Arst5g02771 530 Pfam DNA replication factor Cdt1 C-terminal domain 427 496 IPR032054 -
Arst5g02771 530 SMART CDT1_2 52 181 IPR014939 -
Arst5g02771 530 Pfam DNA replication factor CDT1 like 52 120 IPR014939 -
Arst5g02771 530 MobiDBLite consensus disorder prediction 412 433 - -
Arst5g02771 530 PANTHER DNA REPLICATION FACTOR CDT1 14 524 IPR045173 GO:0003677|GO:0030174|GO:0071163
Arst5g02771 530 CDD Cdt1_m 36 185 IPR014939 -
Arst5g02771 530 SUPERFAMILY "Winged helix" DNA-binding domain 45 183 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02771 Arst-Chr5 82896196 82900726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02771 48 523 Core DNA Replication Machinery Family AT2G31270 31.225 6.40e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02771 K10727 - gmx:102670055 585.489