Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02758 ATGAAAATCTCAAAACCTTCATGGTACTCTCATACTCTGACTTTGTTCTTCTTCATCATCATCATTATGATGAGTCATGTTGCAAACTCTCAGTCTCATCAGCTCTATGATGAAGAACATGCAGTTCTTATGAAGATAAAACAGTACCTTCGAAACCCACCATTTTTAAGCCACTGGACACAGCAATCATCAACTTCCAATAACAACCACTGTTCTTGGCCTGAAATAAACTGCACCACCAATGGCAATTCTGTCATTTCACTCACTCTCTCCAATTCCAACATCACACAAGCCATACCAACCTTCATTTGTGAACTCAAGAACCTCACTTTTATTGACTTCAGCTTCAACTTCATCCCTGTGTCCAAATTGACCAAATTGAAACTCTTTCATGTGTATGCTACAAATTTGGTTGGTGAAATTCCAGAGAACATTGGAGAAATGGTGGATTTGGAGAATTTGGATATGTCACAGAATGGTTTAACTGGTGGAATTCCCAGTGGCTTGTTCCTGCTCAAGAATCTGACCATATTGTACCTTTTTCAGAACAGTCTCTCCGGAGAGATACCTAAAGTTGTTGAAGCATTGAATTTGGTTGATCTTGATCTTGCACAGAATAACCTCACAGGGAAAATTCCAGAAGTTCTTGGAAAGCTTAAGAACATTACTTGGTTGAACTTGTCACTTAATAAGTTGTCAGGGGAGATTCCAGAAGCCTTTGGTAGTCTTCCAGCTATGGTGGATTTTCGTATGTTCTCCAACAATTTGTCAGGTACTCTTCCATCCAAATTCGGCCGCTACTCGAGGCTTGAAACCTTTCTGGTTTCATCTAATATTCTTAGTGGAAATTTACCAGAGAATTTATGTTACAATGGCAGGTTACTTAATTTAACTGTGTATGACAATAATCTTAGTGGTGAGTTGCCAAAATCACTAGGAAATTGTAATAGCCTACTTGATCTGAAAATTTACAACAATAAGTTTTCTGGTAACATTCCTAGTGGTCTTTGGACATCTTTGAATTTGTCAAATTTCATGGTGAGCCATAACAATTTCACTGGTGAGCTTCCTGAGATGCTGTCCTCTAGCATTTTGCGGCTCGAGATAAGTTTCAATCAACTTTCTGGTAGAATTCCAGCTACTGTGTCTTCTTGGAGTAATGTGGTAGTGTTTGATGCAAGTAAGAACAACTTGAATGGAAGCATTCCACAAGAGCTAACTTCTCTTCCAAAGTTAACAACCCTATTGCTTGATCAGAACCAGCTCACTGGGCCGCTTCCTTCGGACATAATCCATTGGGAGAATCTAGTGACTCTGAATTTGAGACAGAACCAGCTCTCTGGACAAATACCAGATGCACTCGGCCGGCTGCCGGTGCTTAGCCAGCTTGACCTTTCAGAAAATCAATTCACTGGCCAAGTTCCTTCTCAGCTTCCAAGACTCACCAATCTCAATCTTTCTTCCAATCATTTGACAGGAAAGGTTCCATATGAATTTGAAAATTCTGCATTTGACACCAGCTTTTTGGACAATCCTGGCCTTTGTTCTGATACCCCGGAACTGAACCTTGCATTGTGTAATTCTACTCCACAAAGATCAGGCAAGGGTTCATCTTGGTCTGTTTCTTTGATTACAAGTCTTGTTGTAGCAGCCTTCTTAATGGCTTTGTTGGCAACACTCTTGATTATGAGGCTTTACAGAAAAAGAAAGCAAGAATTTGATAACTCATGGAAGCTAATTTCATTTCAAAGGCTGAATTTCACAGAATCAGACATTCTCTCCTCATTAACTGAGCAGAATATTATTGGCAGTGGTGGATATGGTGCAATTTATCGTTGCCCTGTCGATGATTTCGGCTATGTTGCTGTGAAAAAGATTTGGAATGACAGGAAGTTAGATCAGAAGCTCAAGAGCTCGTTTCGCGCTGAAGTTAATGCGCTGAGCAATATTCGCCATACTAACATTGTGAGGTTGTTGTGCTGCATTTCAAATGAGGAATCTATGCTCCTTGTTTACGAGTATATGGAAAATAGTAGCCTAGATAAGTGGCTGCACAAGAAGTATAATAAGGCCTCCAATTTCTCAAGTTCAGCAGCAGTGCATCATGTTTTTCTTGATTGGCCAAAGAGGTTGCAAATAGCAATAGGAGTTGCACAAGGTTTGAGCTACATGCACCATGATTGCTCACAACCTATTGTTCATAGAGATGTGAAAACAAGCAACATTCTCTTGGATGCTCAATTCAATGCAAAAGTTGCAGATTTTGGTCTGGCTAGGATGTTGCTCAAGCCTGGTCAATTGAACACCATGTCAACTGTGATTGGATCATTTGGCTACATTGCTCCTGAATATACTCAAACAAGAAGGATCACTGAAAAGATTGATGTGTTTAGCTTTGGTGTTGTTCTGTTGGAGCTGACAACTGGCAAAGAGGCGAATGATGGAGACCAACACTTGTCTCTGGCCGAGTGGGCGTGGCGCCACATTCAGATAGGAAGCAACATAGAAGAGCTTCTAGACAAAGATGTCATGGAACCAAGCTACTTGGATGAAATGTGCACAGTTTTCAAACTTGGGGTGATGTGTACTTCAACATTGGCTTCTACTAGACCTTCCATGAAGGAGGTGCTGCAAATGTTGCAACTCTGCAGAGATCAATTTGATTATGGAGGAGACAGTAAGTTAGGCCATTATGATGTTGTTCCTCTTCTTAAGGATTCAAAAAGTGAAACAAGGTTGGATGTTGTTGATACTTTATAA 2760 0.404 MKISKPSWYSHTLTLFFFIIIIMMSHVANSQSHQLYDEEHAVLMKIKQYLRNPPFLSHWTQQSSTSNNNHCSWPEINCTTNGNSVISLTLSNSNITQAIPTFICELKNLTFIDFSFNFIPVSKLTKLKLFHVYATNLVGEIPENIGEMVDLENLDMSQNGLTGGIPSGLFLLKNLTILYLFQNSLSGEIPKVVEALNLVDLDLAQNNLTGKIPEVLGKLKNITWLNLSLNKLSGEIPEAFGSLPAMVDFRMFSNNLSGTLPSKFGRYSRLETFLVSSNILSGNLPENLCYNGRLLNLTVYDNNLSGELPKSLGNCNSLLDLKIYNNKFSGNIPSGLWTSLNLSNFMVSHNNFTGELPEMLSSSILRLEISFNQLSGRIPATVSSWSNVVVFDASKNNLNGSIPQELTSLPKLTTLLLDQNQLTGPLPSDIIHWENLVTLNLRQNQLSGQIPDALGRLPVLSQLDLSENQFTGQVPSQLPRLTNLNLSSNHLTGKVPYEFENSAFDTSFLDNPGLCSDTPELNLALCNSTPQRSGKGSSWSVSLITSLVVAAFLMALLATLLIMRLYRKRKQEFDNSWKLISFQRLNFTESDILSSLTEQNIIGSGGYGAIYRCPVDDFGYVAVKKIWNDRKLDQKLKSSFRAEVNALSNIRHTNIVRLLCCISNEESMLLVYEYMENSSLDKWLHKKYNKASNFSSSAAVHHVFLDWPKRLQIAIGVAQGLSYMHHDCSQPIVHRDVKTSNILLDAQFNAKVADFGLARMLLKPGQLNTMSTVIGSFGYIAPEYTQTRRITEKIDVFSFGVVLLELTTGKEANDGDQHLSLAEWAWRHIQIGSNIEELLDKDVMEPSYLDEMCTVFKLGVMCTSTLASTRPSMKEVLQMLQLCRDQFDYGGDSKLGHYDVVPLLKDSKSETRLDVVDTL 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02758 919 SUPERFAMILY RNI-like 197 500 - -
Arst5g02758 919 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
Arst5g02758 919 Gene3D Ribonuclease Inhibitor 194 290 IPR032675 -
Arst5g02758 919 FunFam Kinase family with leucine-rich repeat domain-containing protein 675 895 - -
Arst5g02758 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Arst5g02758 919 ProSitePatterns Protein kinases ATP-binding region signature. 602 625 IPR017441 GO:0005524
Arst5g02758 919 SUPERFAMILY Protein kinase-like (PK-like) 589 884 IPR011009 -
Arst5g02758 919 FunFam Receptor-like protein kinase HSL1 576 674 - -
Arst5g02758 919 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 118 189 - -
Arst5g02758 919 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Arst5g02758 919 FunFam Receptor-like protein kinase HSL1 isoform A 202 526 - -
Arst5g02758 919 SMART serkin_6 596 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02758 919 ProSiteProfiles Protein kinase domain profile. 596 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02758 919 Gene3D Ribonuclease Inhibitor 363 432 IPR032675 -
Arst5g02758 919 Gene3D Ribonuclease Inhibitor 433 514 IPR032675 -
Arst5g02758 919 Gene3D Ribonuclease Inhibitor 291 362 IPR032675 -
Arst5g02758 919 Gene3D Phosphorylase Kinase; domain 1 581 674 - -
Arst5g02758 919 Pfam Protein kinase domain 598 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02758 919 Gene3D Transferase(Phosphotransferase) domain 1 675 894 - -
Arst5g02758 919 SUPERFAMILY L domain-like 38 195 - -
Arst5g02758 919 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 23 881 - -
Arst5g02758 919 SMART LRR_typ_2 219 242 IPR003591 -
Arst5g02758 919 SMART LRR_typ_2 409 433 IPR003591 -
Arst5g02758 919 SMART LRR_typ_2 434 457 IPR003591 -
Arst5g02758 919 SMART LRR_typ_2 478 501 IPR003591 -
Arst5g02758 919 SMART LRR_typ_2 148 172 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02758 Arst-Chr5 82811310 82814515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02758 88 881 Receptor kinase-like Gene Family AT5G25930 50.864 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst5g02758 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02758 - - aip:107641433 1658.66