Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02701 ATGCATACGATGAAAAAGAATTCTGACCTTAGTGAGATTGGATCTGTATTCAACAACTTGGCTAAGCAGCTTGAGGAACCTGTTGACTTTGAGCTTCCAGATTCGTTTACCAAGAATAAACCTGTGCAGTATAGATCCATAAAGCGCAATATATATACTTCAAAGAAGTTTAAGAGACGGTTTGATGATGGCATATTCTGTTCTTGTACTCCTTCACCTGAATCTCCGAATGTGTGTGGTATTGATTGCCACTGTGGGGTGCTTTTATCTTGCTGTTCTTCAGCCTGTAAATGTGGGAGCTCCTGTCTCAACAAACCATTTCAGCATCGTCGGGTGAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGCTCTGGTATTGTAGCTGCTGAAGATATTAAGCTTGGGGAGTTTGTTATAGAATATGTTGGAGAAGTAATTGATGACAAAACATGTGAAGAAAGACTTTGGAACATGAAGCATCGTGGGGATTCAAACTTTTACTTATGTGAAATCAATCGAGATACTGTGATTGATGCCACATATAAGGGAAACAAATCTAGATATATCAATCATAGTTGCTGTCCCAATACAGAGATGCAGAAATGGTTGGCTATGAATTGTTTTGTTAGTGTTAGGATAGCAGATGGTGAAACCAGAATAGCCATTTTTGCTACACGAGACATTCAAAAGGGTGAACAACTCACCTACGATTACCGCAGGTTTGTCCAATTTGGCGCAGACCAAGAATGTCACTGCGGTGCTGTTGCCTGCAGGCGTAAGCTTGGTGTCCAACCTACAAAGCCTAAAATGTATATCAGAATGGAGGTTTGCAAATTGGCAGTTCTCAAGTTTTTGCGCAATCAAAAAGCTTAA 876 0.3995 MHTMKKNSDLSEIGSVFNNLAKQLEEPVDFELPDSFTKNKPVQYRSIKRNIYTSKKFKRRFDDGIFCSCTPSPESPNVCGIDCHCGVLLSCCSSACKCGSSCLNKPFQHRRVKKMKLVQTEKCGSGIVAAEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHRGDSNFYLCEINRDTVIDATYKGNKSRYINHSCCPNTEMQKWLAMNCFVSVRIADGETRIAIFATRDIQKGEQLTYDYRRFVQFGADQECHCGAVACRRKLGVQPTKPKMYIRMEVCKLAVLKFLRNQKA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02701 291 Gene3D SET domain 19 277 IPR046341 -
Arst5g02701 291 ProSiteProfiles AWS domain profile. 62 111 IPR006560 GO:0005634|GO:0042054
Arst5g02701 291 SMART set_7 113 246 IPR001214 GO:0005515
Arst5g02701 291 ProSiteProfiles Post-SET domain profile. 247 263 IPR003616 -
Arst5g02701 291 ProSiteProfiles SET domain profile. 113 240 IPR001214 GO:0005515
Arst5g02701 291 CDD SET_ASHR3-like 114 263 - -
Arst5g02701 291 PANTHER SET DOMAIN PROTEINS 27 270 - -
Arst5g02701 291 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 8 289 IPR025787 -
Arst5g02701 291 Pfam SET domain 124 239 IPR001214 GO:0005515
Arst5g02701 291 SMART PostSET_3 247 263 IPR003616 -
Arst5g02701 291 FunFam Histone-lysine N-methyltransferase 30 280 - -
Arst5g02701 291 SMART shorttest3 62 112 IPR006560 GO:0005634|GO:0042054
Arst5g02701 291 SUPERFAMILY SET domain 26 253 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02701 Arst-Chr5 81393867 81403493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02701 92 262 C2H2 Transcription Factor Family AT2G23740 35.484 1.46e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst5g02701 SET 6.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02701 - - ahf:112751595 529.635