Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02698 ATGCATACGATGAAAAAGAATTCTGACCTTAGTGAGATTGGATCTGTATTCAACAACTTGGCTAAGCAGCTTGAGGAACCTGTTGACTTTGAGCTTCCAGATTCGTTTACCAAGAATAAACCTGTGCAGTATAGATCCATAAAGCGCAATATATATACTTCAAAGAAGTTTAAGAGACGGTTTGATGATGGCATATTCTGTTCTTGTACTCCTTCACCTGAATCTCCGAATGTGTGTGGTATTGATTGCCACTGTGGGGTGCTTTTATCTTGCTGTTCTTCAGCCTGTAAATGTGGGAGCTCCTGTCTCAACAAACCATTTCAGCATCGTCGGGTGAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGCTCTGGTATTGTAGCTGCTGAAGATATTAAGCTTGGGGAGTTTGTTATAGAATATGTTGGAGAAGTAATTGATGACAAAACATGTGAAGAAAGACTTTGGAACATGAAGCATCGTGGGGATTCAAACTTTTACTTATGTGAAATCAATCGAGATACTGTGATTGATGCCACATATAAGGGAAACAAATCTAGATATATCAATCATAGTTGCTGTCCCAATACAGAGATGCAGAAATGGATAGCAGATGGTGAAACCAGAATAGCCATTTTTGCTACACGAGACATTCAAAAGGGTGAACAACTCACCTACGATTACCGGTTTGTCCAATTTGGCGCAGACCAAGAATGTCACTGCGGTGCTGTTGCCTGCAGGCGTAAGCTTGGTGTCCAACCTACAAAGCCTAAAATGTCAGTTAAATGTCAGGTATATCAGAATGGAGGTTTGCAAATTGGCAGTTCTCAAGTTTTTGCGCAATCAAAAAGCTTAAAAGTTTGCATTGGGGAAGTTATTAGGATAAAACACCTTGAACATGTGAGGTTTGGGCTTATTAAATGGTTTAACAAATATTCCCGAAAACACTTGATCCTGTTTGAAGATGGCTGTGTTGAAATTTTTGACATGTCTAAAGAAGATTGGGAACTCACTAGTTTGTGGTGCAATTACTTTTGA 1041 0.3919 MHTMKKNSDLSEIGSVFNNLAKQLEEPVDFELPDSFTKNKPVQYRSIKRNIYTSKKFKRRFDDGIFCSCTPSPESPNVCGIDCHCGVLLSCCSSACKCGSSCLNKPFQHRRVKKMKLVQTEKCGSGIVAAEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHRGDSNFYLCEINRDTVIDATYKGNKSRYINHSCCPNTEMQKWIADGETRIAIFATRDIQKGEQLTYDYRFVQFGADQECHCGAVACRRKLGVQPTKPKMSVKCQVYQNGGLQIGSSQVFAQSKSLKVCIGEVIRIKHLEHVRFGLIKWFNKYSRKHLILFEDGCVEIFDMSKEDWELTSLWCNYF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02698 346 SUPERFAMILY SET domain 26 242 IPR046341 -
Arst5g02698 346 ProSiteProfiles AWS domain profile. 62 111 IPR006560 GO:0005634|GO:0042054
Arst5g02698 346 CDD SET_ASHR3-like 114 252 - -
Arst5g02698 346 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 8 283 IPR025787 -
Arst5g02698 346 Gene3D SET domain 20 269 IPR046341 -
Arst5g02698 346 ProSiteProfiles Post-SET domain profile. 236 252 IPR003616 -
Arst5g02698 346 SMART PostSET_3 236 252 IPR003616 -
Arst5g02698 346 FunFam Histone-lysine N-methyltransferase 30 268 - -
Arst5g02698 346 SMART set_7 113 236 IPR001214 GO:0005515
Arst5g02698 346 SMART shorttest3 62 112 IPR006560 GO:0005634|GO:0042054
Arst5g02698 346 PANTHER SET DOMAIN PROTEINS 27 266 - -
Arst5g02698 346 ProSiteProfiles SET domain profile. 113 230 IPR001214 GO:0005515
Arst5g02698 346 Pfam SET domain 124 229 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02698 Arst-Chr5 81393867 81403493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02698 92 251 C2H2 Transcription Factor Family AT2G23740 35.556 1.11e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst5g02698 SET 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02698 - - ahf:112751595 664.07