Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02696 ATGCATACGATGAAAAAGAATTCTGACCTTAGTGAGATTGGATCTGTATTCAACAACTTGGCTAAGCAGCTTGAGGAACCTGTTGACTTTGAGCTTCCAGATTCGTTTACCAAGAATAAACCTGTGCAGTATAGATCCATAAAGCGCAATATATATACTTCAAAGAAGTTTAAGAGACGGTTTGATGATGGCATATTCTGTTCTTGTACTCCTTCACCTGAATCTCCGAATGTGTGTGGTATTGATTGCCACTGTGGGGTGCTTTTATCTTGCTGTTCTTCAGCCTGTAAATGTGGGAGCTCCTGTCTCAACAAACCATTTCAGCATCGTCGGGTGAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGCTCTGGTATTGTAGCTGCTGAAGATATTAAGCTTGGGGAGTTTGTTATAGAATATGTTGGAGAAGATGGTGAAACCAGAATAGCCATTTTTGCTACACGAGACATTCAAAAGGGTGAACAACTCACCTACGATTACCGGTTTGTCCAATTTGGCGCAGACCAAGAATGTCACTGCGGTGCTGTTGCCTGCAGGCGTAAGCTTGGTGTCCAACCTACAAAGCCTAAAATGTCAGTTAAATGTCAGGTATATCAGAATGGAGGTTTGCAAATTGGCAGTTCTCAAGTTTTTGCGCAATCAAAAAGCTTAAAAGTTTGCATTGGGGAAGTTATTAGGATAAAACACCTTGAACATGTGAGGTTTGGGCTTATTAAATGGTTTAACAAATATTCCCGAAAACACTTGATCCTGTTTGAAGATGGCTGTGTTGAAATTTTTGACATGTCTAAAGAAGATTGGGAACTCACTAGTTTGTGGTGCAATTACTTTTGA 861 0.3995 MHTMKKNSDLSEIGSVFNNLAKQLEEPVDFELPDSFTKNKPVQYRSIKRNIYTSKKFKRRFDDGIFCSCTPSPESPNVCGIDCHCGVLLSCCSSACKCGSSCLNKPFQHRRVKKMKLVQTEKCGSGIVAAEDIKLGEFVIEYVGEDGETRIAIFATRDIQKGEQLTYDYRFVQFGADQECHCGAVACRRKLGVQPTKPKMSVKCQVYQNGGLQIGSSQVFAQSKSLKVCIGEVIRIKHLEHVRFGLIKWFNKYSRKHLILFEDGCVEIFDMSKEDWELTSLWCNYF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02696 286 Gene3D SET domain 146 209 IPR046341 -
Arst5g02696 286 Gene3D SET domain 19 145 IPR046341 -
Arst5g02696 286 Pfam SET domain 148 169 IPR001214 GO:0005515
Arst5g02696 286 ProSiteProfiles SET domain profile. 40 170 IPR001214 GO:0005515
Arst5g02696 286 ProSiteProfiles AWS domain profile. 62 111 IPR006560 GO:0005634|GO:0042054
Arst5g02696 286 PANTHER SET DOMAIN PROTEINS 146 208 - -
Arst5g02696 286 SUPERFAMILY SET domain 26 182 IPR046341 -
Arst5g02696 286 SMART set_7 113 176 IPR001214 GO:0005515
Arst5g02696 286 SMART shorttest3 62 112 IPR006560 GO:0005634|GO:0042054
Arst5g02696 286 ProSiteProfiles Post-SET domain profile. 176 192 IPR003616 -
Arst5g02696 286 SMART PostSET_3 176 192 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02696 Arst-Chr5 81393867 81403493 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst5g02696 SET 2.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02696 - - gmx:100794521 367.851