Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02676 ATGATTTTTGAGAATGAGGTTTTTAAGCAAGACTGGAGGTCTAGAAAGAAGGTACAGATATTCCAGTATCTGATACTTAAGTGGGGATTTGCTCTTCTTATTGGATTAGGTACTGGAATTATTGGCCTTTTCAATAGTATTTCAGTTGAGAATATAGCAGGTTTCAAGCTGCTTAGGACTACCAGTCTCATATCTGAACACAGATATCTTGAAGCTTTTGTTGTATATGCCGGTATCAATGTGGTTTTAGCAGCAGCCGCCGGTGCACTTTGTGCTTTTATTTCCCCAGCAGCAGCAGGCTCTGGTATCCCAGAGGTAAAAGCATATCTGAATGGTGTGGATTCACACTCTATACTGGCTCCGAGCACTCTTTTTGTAAAGATTATTGGTTCTATCCTGGGAGTTTCTTCTGGATTTGTGGTAGGCAAAGAAGGACCTATGGTACATACAGGTGCATGCTTAGCTTCTTTGTTGGGGCAGGGTGGATCTCGCAAGTATGGCTTGACTTGGTCTTGGCTTAGATATTTCAAAAATGACCGTGATCGGCGAGACCTGATAACTTGTGGTGCGGCTGCTGGTGTTGCTGCTGCCTTTCGTGCTCCAGTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGCGGAGTGCTCTTCTCTGGAGAACATTTTTCACAACAGCAGTGGTTGCTATTTTTTTCAGAGTTGCAATTCAGTTTTGCTCCACAGGGAAATGCGGGTTATTTGGGGAAGGTGGTCTGATACTTTATGATGTCAATTCATTCACGGGAACATATAGCGCCAGTGACTTAGTAGCAACCATACTATTGGGAATCATTGGAGGCCTTCTTGGAAGTTTGTATAACTACCTTGTTGATAAGGTTGTTCGTACATATAGCATCATCAATGAAAAAGGTGCAGCGTTCAAAATCATGCTTGTTGTTGCAATTTCTCTTTTGACATCATGTTGTTATTATTTCCTACCATGGATTTCAACCTGTGCACCCTGCCCAACTGATAAAACAGAAATCTGTCCCTCGGTCAATGAGTCTGGAGAATACAAAAGGTTTCAGTGCAAACCAGGCTACTACAATGATCTTGCTTCACTCTTTCTAAACACCAATGATGATGCTATTCGTAATCTCTACAGCTCGAGGTTAACCAAGGAGTTTCATATTTCCAGCTTGGGCATCTACTTTGCCACTATCTACTCTCTTGGGATAATCACTTACGGCATTGCTATTCCATCCGGGCTTTTCATTCCAGTTATCCTTGCCGGCGCTGCGTATGGCCGGTTTATAGGGACACTATTCAAACCGATCGCCACTCTTGACACAGGACTCTTTGCTCTCCTTGGATCTGCATCCCTCCTTGGTGGCACCATGAGAATGACAGTCTCAATTTGTGTCATATTGCTTGAACTCACAAATGATCTCTTGTTACTCCCACTTGTGATGGTAGTATTACTAATCTCAAAAACTGTGGGTGATTCCTTCAACAAGGGTGTCTATGACCAAATACTGAAGATCAAAGGGATTCCTTATTTGGAGGCTCATGCAGAACCTTACATGCAGAATTTGGTTGCACGTGACGTCGTCTCTGGCCTACTAATCACCTTTTCAGGTATAGAAAAGGTGGGAAATATACTGCATGCTCTGGAAAATACAGGGCACAATGGTTTTCCTGTCATCAATGAACCACCTTTCACGGATATACCAGAGCTCTGTGGACTTGTGCTGAGGTCCCATTTGCTAGTGTTGCTGAAGGCAAAGATTTTTTCGAAGGAAAGGGTGCTTGTGAGCCATGACACCTTCCAAAGAATTTCTGCATTGGATTTCGGAAAGCCAGGACTAGGGAAGGGTGTAAAACTAGAGGATCTAGATATCAAGGAGGAAGAGCAGGATATGTATGTGGACTTGCATCCTATCAGTAATGCATCACCATACACAGTGCTTGAGACAATGTCACTTGCCAAAGCTGCTGTTCTTTTCCGCACACTCGGACTCAGGCACATGTGTCTTGTTCCGAAGAGCCAACTGAGACCACCAGTTGTTGGGATTCTAACTCGCCATGATTTTATGCGGGAGCATGTTTTGGGACTTCATTCTAACATGAATCCTCATTAA 2130 0.4366 MIFENEVFKQDWRSRKKVQIFQYLILKWGFALLIGLGTGIIGLFNSISVENIAGFKLLRTTSLISEHRYLEAFVVYAGINVVLAAAAGALCAFISPAAAGSGIPEVKAYLNGVDSHSILAPSTLFVKIIGSILGVSSGFVVGKEGPMVHTGACLASLLGQGGSRKYGLTWSWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIFFRVAIQFCSTGKCGLFGEGGLILYDVNSFTGTYSASDLVATILLGIIGGLLGSLYNYLVDKVVRTYSIINEKGAAFKIMLVVAISLLTSCCYYFLPWISTCAPCPTDKTEICPSVNESGEYKRFQCKPGYYNDLASLFLNTNDDAIRNLYSSRLTKEFHISSLGIYFATIYSLGIITYGIAIPSGLFIPVILAGAAYGRFIGTLFKPIATLDTGLFALLGSASLLGGTMRMTVSICVILLELTNDLLLLPLVMVVLLISKTVGDSFNKGVYDQILKIKGIPYLEAHAEPYMQNLVARDVVSGLLITFSGIEKVGNILHALENTGHNGFPVINEPPFTDIPELCGLVLRSHLLVLLKAKIFSKERVLVSHDTFQRISALDFGKPGLGKGVKLEDLDIKEEEQDMYVDLHPISNASPYTVLETMSLAKAAVLFRTLGLRHMCLVPKSQLRPPVVGILTRHDFMREHVLGLHSNMNPH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02676 709 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 2 701 - -
Arst5g02676 709 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 2 701 - -
Arst5g02676 709 PRINTS Plant CLC chloride channel signature 226 236 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst5g02676 709 PRINTS Plant CLC chloride channel signature 244 251 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst5g02676 709 PRINTS Plant CLC chloride channel signature 212 220 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst5g02676 709 PRINTS Plant CLC chloride channel signature 368 384 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst5g02676 709 PRINTS Plant CLC chloride channel signature 1 9 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst5g02676 709 Gene3D - 517 699 IPR046342 -
Arst5g02676 709 Pfam Voltage gated chloride channel 84 497 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 PRINTS Chloride channel signature 416 436 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 PRINTS Chloride channel signature 96 113 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 PRINTS Chloride channel signature 127 146 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 PRINTS Chloride channel signature 466 485 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 PRINTS Chloride channel signature 448 464 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 PRINTS Chloride channel signature 504 518 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst5g02676 709 Gene3D Clc chloride channel 19 516 - -
Arst5g02676 709 ProSiteProfiles CBS domain profile. 644 705 IPR000644 -
Arst5g02676 709 FunFam Chloride channel ClC3 19 335 - -
Arst5g02676 709 SUPERFAMILY Clc chloride channel 5 520 IPR014743 -
Arst5g02676 709 SUPERFAMILY CBS-domain pair 521 697 IPR046342 -
Arst5g02676 709 CDD CBS_pair_voltage-gated_CLC_euk_bac 530 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02676 Arst-Chr5 81273031 81276498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02676 2 708 Ion Channels AT5G49890 71.328 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02676 K05016 - gmx:100777170 1078.93