Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02667 ATGGCAACTAGACTACAGTTTGAGAATAATTGTGAAGTTGGAGTGTTTTCTAAACTTACTAATGCCTATTGTTTGGTTGCCATAGGAGGATCCGAAAACTTCTATAGTGTGTTTGAATCTGAGTTAGCAGACGTCATCCCTGTAGTCAAAACATCCATTGGTGGAACTCGAATTATTGGTCGCCTTTGTGCAGGAAACAAAAATGGGCTTCTGCTGCCCCATACAACTACAGACCAAGAACTTCAACATTTGAGAAACTGTCTGCCCGATCAAGTAGTCGTTCAGAGAATAGAAGAAAGATTATCTGCTCTCGGAAATTGTATAGCTTGTAATGACCATGTGGCTCTCACTCACACCGATCTTGACAGGGAGACGGAGGAAATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACCATTGCCGGCAATATTCTTGTCGGTAGCCACTGTGCCTTCTCCAACAGAGGGGGCTTGGTCCACCCTCATACTTCCATAGAAGACTTGGATGAGCTTTCTACACTTCTTCAGGTTCCTTTGGTGGCTGGGACGGTGAACCGTGGCAGTGAAGTGATAGCTGCTGGAATGACAGTGAATGACTGGACGGCATTTTGTGGCTCGGACACCACAGCGACAGAGCTGTCTGTGATTGAGAGTGTTTTCAAACTGAGGGAGGCACAGCCTAGTGCCATTGTGGATGAGATGAGAAAATCTCTCATTGATAGCTATGTCTAA 738 0.4526 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSVFESELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSHCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02667 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Arst5g02667 245 Gene3D - 1 225 - -
Arst5g02667 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Arst5g02667 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Arst5g02667 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Arst5g02667 245 SUPERFAMILY Pentein 1 224 - -
Arst5g02667 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 244 IPR002769 GO:0042256|GO:0043022
Arst5g02667 245 NCBIfam translation initiation factor IF-6 4 224 IPR002769 GO:0042256|GO:0043022
Arst5g02667 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Arst5g02667 245 FunFam Eukaryotic translation initiation factor 6 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02667 Arst-Chr5 81222628 81225683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02667 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 91.837 3.28e-173 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02667 K03264 - ming:122066887 474.167