Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02662 ATGGTGGATAGGGATTCAAGCGGAGCACACATGTCAATAGCAGCTTCTTCCATGTTTCCTGGCTTTAGGTTCTGTCCCACTGACCATGAGTTGATCTCTTATTACCTCAGAAAAAAATTGGACGGTGACGAGGACAGTGTTCAGATTATTTCCGAGCTTGAACTTTGCACCTTTGAGCCTTGGGATTTGCCTGAAAAATCGTTCATTAAATCAAACGATGAGTGGTTTTTTTTCTCGCGACGAGGGAGAAAGTATCCTAATGGTTCACAAAATAAAAGGGCAACTAAACATGGGTATTGGAGGGTCACATGCAATGAACGACAGATAAAGTCTGGTCAAAATGTGATTGGTACCAAACGCACCTTGGTATTCCATGTCGGCCGAGCTCCTAAAGGCCAGAGAACTGAATGGATTATTCATGAGTACTGCATCAATGACAAATTTCAGGATTCTTTGGTGGTTTGTCGGCTCAAGAGAAACACAAAATTCCATGCGAGTGATAGTTCTAACAAAGCTTTACGCAAGAGTGGTGGTGGAGTCTCAGAAGGGGTTACAGTTCAAAGGAGCACTTGTGTGCCTATTCAAGATCGTTCTAACAAAACTTCATGCAAGAGTAGTGCTTCACGCAAGAGTAGTTGTGGAGTCTCGGAAGGGATTACAATTCAAAGGAGCACTTGTGCGCCTATTCAAGATCGTTCTAACAAAGCTTCACGCAAGAGTAGTTCTTCACGCAAGAGTAGTTGTGGAGTTTCGAAAGGGGTTACGGTTCAAAGGAGCACTTGTGTGCTTATTCAAGATCGTATTAACAAAGCTTCACGCAAGAATTGTTGTGGAGTCTCAGAAGAAGGAGTTACAGTTCAAAGGAGCACTTGTGTGCCTATTCAAGATAAAGAGGTTGGATGTAGTTCCAAGAAGGGTAACAATAATAATAGTTCTCCTTCTACTACTGCCCAAATTGAATCCAGTCGTATAGTTGCCAATGAAGCCAATCCCAAAGCTTCTTCCGGTCATTCTAAGGTGGTGGACGAAGTGGGTTATTATGCAGAGATCAACTTAGTTGATATCATCAACTTAGATGAAACAGCACTCTGA 1092 0.4249 MVDRDSSGAHMSIAASSMFPGFRFCPTDHELISYYLRKKLDGDEDSVQIISELELCTFEPWDLPEKSFIKSNDEWFFFSRRGRKYPNGSQNKRATKHGYWRVTCNERQIKSGQNVIGTKRTLVFHVGRAPKGQRTEWIIHEYCINDKFQDSLVVCRLKRNTKFHASDSSNKALRKSGGGVSEGVTVQRSTCVPIQDRSNKTSCKSSASRKSSCGVSEGITIQRSTCAPIQDRSNKASRKSSSSRKSSCGVSKGVTVQRSTCVLIQDRINKASRKNCCGVSEEGVTVQRSTCVPIQDKEVGCSSKKGNNNNSSPSTTAQIESSRIVANEANPKASSGHSKVVDEVGYYAEINLVDIINLDETAL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02662 363 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Arst5g02662 363 Gene3D NAC domain 27 164 IPR036093 GO:0003677|GO:0006355
Arst5g02662 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 252 - -
Arst5g02662 363 MobiDBLite consensus disorder prediction 228 250 - -
Arst5g02662 363 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Arst5g02662 363 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02662 Arst-Chr5 81169346 81171250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02662 6 166 NAC Transcription Factor Family AT2G27300 66.460 1.06e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g02662 NAM 6.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02662 - - adu:107489720 691.034