Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02621 ATGGAAAAAGAAGATATTTTTGGTTCCGGGCATGCGGTCAAGGCTGATGAGGCTCCAGGGGGCTTCCACGTGGCACCAAGAAGTGAAAATATACAGTTTTCTGCACCCACGGCGGAGCCACCGCAGCAGCCGGTGGTTCCGACCACGGCTATGGTGGCAGTAACACCGGCGACAGGGACGGATGGGAAGAAGAAGAGGGGGAGGCCTAGAAAGTATGGACCGGACGGCAAGTTGACGCCGGAGGCAGCAGCGAAGGCGTTGTCTCCGATGCCAATATCGGCGTCGATTCCGTTGACCGGAGAGTTCTCAGGGTGGAAAAAGGGTAGAGGAAAGGCTGTTGAATCAATGAAGAAGTCATATAAATTTTTTGAGTTTGAAAATGCTGGAGGACCAGGTAATGGAATTGCATACTCAGTTGGTGCCAACTTCACACCTCACATTCTTACAGTAAATGCTGGAGAGGATGTTACTATGAAGATTATGTCCTTTTCTCAGGACGGATCCCGCGCCATATGCATTCTCTCTGCCAATGGCACGATTTCAAATGTCACGCTCCGTCAACCAACCTCTTCCGGCGGCACTTTAACATATGAGGGACGGTTCGAGATTCTTTCCTTGTCTGGCTCATATATGCCAACCGAGAACGGATTCACAAGGAGCAGATCTGGTGGGATGAGTGTTTCTTTGGCAGGTCCAGATGGTCGAGTAATGGGAGGAGGACTTGCCGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTTGGTAGTTTCATTCCAGGTCACCAGTTAGAACATAAACAAAAGAAGCAAAGGGTGGAACACCATATATCATCAACTATATCTGCTCCACTTAATGTTCCTACTATTTCTGCTGAAGAAATGAAGATAAGTCTTGGTGGAGTGAAGCCTTTCATGACACCCCCTTCGGTTCCTTTTCAAGTCGAAAACATTCCTCCTCCTCCTCCTCCTGCGTTTGTCAACGGCCAATGTTCTCTGAACTCATCTGGTGACGACGATGATGAAGAAGATGCCTCTTTGCATGAGAAAGAATCTAATCCTAGTCTTTCAGATCCTGCTGGAGTTGCATGCTAA 1095 0.4877 MEKEDIFGSGHAVKADEAPGGFHVAPRSENIQFSAPTAEPPQQPVVPTTAMVAVTPATGTDGKKKRGRPRKYGPDGKLTPEAAAKALSPMPISASIPLTGEFSGWKKGRGKAVESMKKSYKFFEFENAGGPGNGIAYSVGANFTPHILTVNAGEDVTMKIMSFSQDGSRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPTENGFTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVGSFIPGHQLEHKQKKQRVEHHISSTISAPLNVPTISAEEMKISLGGVKPFMTPPSVPFQVENIPPPPPPAFVNGQCSLNSSGDDDDEEDASLHEKESNPSLSDPAGVAC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02621 364 MobiDBLite consensus disorder prediction 313 364 - -
Arst5g02621 364 MobiDBLite consensus disorder prediction 313 327 - -
Arst5g02621 364 FunFam AT-hook motif nuclear-localized protein 1-like 145 276 - -
Arst5g02621 364 ProSiteProfiles PPC domain profile profile. 140 283 IPR005175 -
Arst5g02621 364 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 258 IPR005175 -
Arst5g02621 364 Gene3D - 145 279 - -
Arst5g02621 364 MobiDBLite consensus disorder prediction 1 77 - -
Arst5g02621 364 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 261 - -
Arst5g02621 364 CDD DUF296 144 258 IPR005175 -
Arst5g02621 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 328 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02621 Arst-Chr5 80485697 80490056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02621 53 271 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 63.274 5.81e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02621 - - gmx:100803208 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02621 5 80485697 80490056 Arst9g02391 9 86130642 86136835 ECH
Arst5g02621 5 80485697 80490056 Arst5g02621 5 80485697 80490056 ECH
Arst5g02621 5 80485697 80490056 Arst9g02391 9 86130642 86136835 PCT