Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02604 ATGGTTTCCAAGGCGGAGAACGTTTTCCATGGAAACAGCAATGGCAATAGTGTTAGTATTGATGAGTTGTTCAAAGCTCAAGCTCACCTGTATAGAGTCATGGCAAGTTACACCTTACCCATGTGTGTCAAGTGGGCTATCGACCTTTCCATACCAAACATCATCCATAACCGCCATTCCCATTCCATTTCCCTCTCCGATCTCGTGTCGGCTCTTAACGCTCCACCACCAAAAACTCAATATGTCCAGCGCATCATGCGCTTGTTGACACACGACGGTATATTTGCCGTCGTGGTCAACGAAGAAAGTAAAGAAGAAGAATATGTACTTACTCCCACTTCTGAGCTCCTTGTAAAGGGCACTGATCATTGTGTCTCGGCCATGGCCGAGTACATTATTAACCCAACTACGGTCGGATTTTATAATTATTTGGCTAAATGGACTTGCGACGAGAAGGGACAAACAACTGTTGAAACTGCTTTAGGGTCTTCCGCTGGCTACTGGGATTTCATTCATGAAAATCCTAAGGAGTTGAAGATTTTCAACGATGGTATGGAGAGTGATTCTAACGTTGTGAGGTTTGCTTTGAGGGATTGTAAATCGGTGTTTGAAGGGTTGGATTCGTTGGTTGATGTTGGTGGGGCCACTGGTAACACTGCTAAGATCATTTGTGAAGCGTTTCCGAAGCTGAAATGCAGAGTGTTGGATCTTCCACATGTTGTTGCTGGTTTGCCTGAAACTGAAAACTTGAAATTTTTTGGAGGGAGCATGTTTGATTTTATCCCTCATGCTGATGCTATTTTATTCAAGTGGGTTCTGGGCAATTGGAGTGATGATCATTGCATACAAGTCCTAGAAAAATGTAAGGAAGCAATTTCAGGCAAAAGTGGCGGAGGAAAAGTGATTATTATTGACATAGTAATAAATGAAAATGAAGATGAGCATGATGTAATGGAACTAAAACTATTTTCTGATATAGCTGCAATGACTCTTCTTGATGGAAAAGAGAGAGACGAGAAAGATTGGAAAAAACTCTTCTTGAAAGCAGGCTTCAAGAACTACAAAGTGTTTTCCATATTTGGCTTTAGGTCGCTTATTGAGGTTTATCCTTAA 1113 0.4151 MVSKAENVFHGNSNGNSVSIDELFKAQAHLYRVMASYTLPMCVKWAIDLSIPNIIHNRHSHSISLSDLVSALNAPPPKTQYVQRIMRLLTHDGIFAVVVNEESKEEEYVLTPTSELLVKGTDHCVSAMAEYIINPTTVGFYNYLAKWTCDEKGQTTVETALGSSAGYWDFIHENPKELKIFNDGMESDSNVVRFALRDCKSVFEGLDSLVDVGGATGNTAKIICEAFPKLKCRVLDLPHVVAGLPETENLKFFGGSMFDFIPHADAILFKWVLGNWSDDHCIQVLEKCKEAISGKSGGGKVIIIDIVINENEDEHDVMELKLFSDIAAMTLLDGKERDEKDWKKLFLKAGFKNYKVFSIFGFRSLIEVYP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02604 370 Pfam O-methyltransferase domain 141 352 IPR001077 GO:0008171
Arst5g02604 370 Gene3D Vaccinia Virus protein VP39 118 370 IPR029063 -
Arst5g02604 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 370 IPR016461 GO:0008168
Arst5g02604 370 Gene3D - 12 117 IPR036388 -
Arst5g02604 370 FunFam O-methyltransferase ZRP4 119 370 - -
Arst5g02604 370 SUPERFAMILY "Winged helix" DNA-binding domain 21 121 IPR036390 -
Arst5g02604 370 Pfam Dimerisation domain 41 90 IPR012967 GO:0046983
Arst5g02604 370 PANTHER O-METHYLTRANSFERASE 26 355 IPR016461 GO:0008168
Arst5g02604 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 369 IPR029063 -
Arst5g02604 370 PIRSF O-mtase 9 370 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02604 Arst-Chr5 80321575 80324814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02604 32 368 Monolignol Biosynthesis Gene Families AT5G54160 31.304 4.00e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02604 K22588 K13262 gmx:100819853 361.688