Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02569 ATGCCTCCTCCATTTGATTCTATCTCTAAGATCCACCCTCCAAAGGAGGCATGGAGACTTAAAGTTAGGGTACTAAGAACTTGGATTGTTCCTTCTTTTGGAAATTATGATGTTGCAAATTCAATGGAAATTGTTCTTGTTGATGGAGATTCTAACAAAATACAAGCAACTGTTAAGAAGCAGCTCATAAATAGGTTTAAAGAGAGTATTGTTGAGGGTCAAACATACCGAATGTCATATTTTAGTGTTGTTCCAAACCAAGGCAATTATAGGGCAGCAGAACATGAGTTTAAGTTGGTTTTTCTTAACCGTACAACTGTTATCCCTGTCCCTGACGATGATATCCCAAAGACATGTTTCAGTTTCTGTCCCTTTGATGAGCTCTTGAATATGACTGAAGATTATGTTTACTTAGTTGATGTTATTGGTTTGCTAACTTCTGTTGGTGAAGAGAAAGAGTATGTGAAAGATGCGAAAGTGATGAAGATGATCGTTCTTGAGTTATCTTCAAAAGAGTTGACAATACGTTGTGCTTTGTTTGGGGAGTATGTGGATGAAGTGCATCGTTTCTTAGGTTCTGGCTATATGGAGCAGCCAGTTGTTGTGATCCAACTTGCCAAAGTTAAATTTTTTAGGGGACAAGTTGGTCTCCAAAATGTTATGCATGCTACTCGGCTGTTCTTTAATCCAGATTTGTCTGAAGTAGTTAATTTCAAAAACAGTATGATTGACCAAGGTATCAATGGAACATAG 753 0.3745 MPPPFDSISKIHPPKEAWRLKVRVLRTWIVPSFGNYDVANSMEIVLVDGDSNKIQATVKKQLINRFKESIVEGQTYRMSYFSVVPNQGNYRAAEHEFKLVFLNRTTVIPVPDDDIPKTCFSFCPFDELLNMTEDYVYLVDVIGLLTSVGEEKEYVKDAKVMKMIVLELSSKELTIRCALFGEYVDEVHRFLGSGYMEQPVVVIQLAKVKFFRGQVGLQNVMHATRLFFNPDLSEVVNFKNSMIDQGINGT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02569 250 Pfam Domain of unknown function DUF223 43 132 IPR003871 -
Arst5g02569 250 Gene3D - 4 113 IPR012340 -
Arst5g02569 250 CDD RPA1_DBD_A_like 19 107 - -
Arst5g02569 250 SUPERFAMILY Nucleic acid-binding proteins 120 242 IPR012340 -
Arst5g02569 250 CDD RPA1_DBD_B_like 140 243 - -
Arst5g02569 250 Gene3D - 114 248 IPR012340 -
Arst5g02569 250 FunFam Replication protein A subunit 4 112 - -
Arst5g02569 250 SUPERFAMILY Nucleic acid-binding proteins 3 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02569 Arst-Chr5 77291935 77310941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02569 8 235 Core DNA Replication Machinery Family AT2G06510 27.731 1.09e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02569 - - adu:107489369 504.212