Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02538 ATGGCAGAAGGTGCTGAAGAATTTGTACAACAGACGAACTCACCCAGTGAAATTGTTGCCAGTCAATCAATTTCTGAGAATATAGAAAACTACACTAGCTCTGATGAGGTCATAAACCAAGCTATTGGTGACGAGGAGGTAGATCCCGAGGTAGGAATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGGCTAGAACTGGATTTGTCGTCAAAATAAGAACCACCGGCTGGGAGACCATAAACGATCAGAGGGTGGTTGTTAATCAAGCTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAAGGAAAACAGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGGTATCCCACTCACACCCGCTTAATCCGAAGCTATCTGGAATGTTCTCAGCAAACCGTCAGCTAAGTATGCATGTGAAGGACCTGATACAGCAAAATGACCAAGCTGGCATTAGACCGAGTAAGACGTACCAGGCACTAGCCAATGCAGTCGGTGGCCCTGCCAACCTCACCTTTACAGAGAAGGATGTTAGAAATTACATTAGTCGTCACTTACGCATTTCTGGGGATGAGACGGATCCAAAAGAGTTACTTAAGCACTTCTCACGGATGAAGGAGCTCAATCCAAACTTTTTCTTTGAAATAGATGTGGATGAAAACCATAGCATTAGAAATGTGTTTTGGGCCGATGCTCGGTGTAGAGCTGCATGGGAATATTTTGGTGATGTCGTGACATTTGACACTACTTACAAGACTAATAGGTACGACGTGCCGTTTGGGTCTTTCGTAGGTGTCAACCACCATGGGATGTCTACGCTTCTTGGGTGCGCATTATTGCGGAATGAGGACACTCATATGTTTGCTGACCGACACATGTGGGTGCCAGTATTTTTCAAGGATGAATTCTGGGCTGGCATGAGGAGCACACAGCGTAGTGAGAGCATGCATTCAGTTTTTGATAAGTACTTAAATAGTAAGAGCTCTTTGTTGCAATTTGTTCGCCAATACCAAAACTGTGTTATAGACAAGGAGCAAAAGGAGCTTGAGTGTGACGCTGCTGATTTAAGGGGTATTATCCCTTGTGTTTCCAGCTCACCAATAGAGAAGCAGTTCCAGAGAGAATATACAAACTCCATGTTTCGAGACGTTCAGGATCAATTTATAAAAAAGGCCGATTGTGACATCTCCTTAATCAACCATCATGGCACAAGTATAGTTTGTGAAGTTGACCAACAAAAGATGGTGTTTGACATGTCAGTGTACAGCAGATACCAAGTCGTGTATTGCTCGCAATCATCAGACGTTCAATGTGATTGCTTTATGTTCCAATCGAATGGTATTCTATGCTGCCACAGTCTTGCTGTTCTTCTACATTTTCGTGTGACATCAGTGTCCTCACAATACATTCTATCCCGATGGAGTAAGAATGTTAGTCGGAGACACACATACATCAGGAGTAGCATTGACATGGACCGTTCTGATGAAAGCATGACAATTTTTAGGCAATTGTGTTCTGATTTTTACAACATCGCTCAGGATTTTGTGGCTACTCCAGAGGTTGCTGCTATATTGCGTGGTGCCATGGACAGTGCTCGGGAGAAGCTCAGAGAACACAAGGAATTCGAGCATCAAGCTGCACATGTACCAAGTGCGATTTACTCACATACGCATGATGAGTGTCCCGTTAGCATGGATGAGCTACATGGCCCACGTCGTGTTCCTACGCGAGGTCGTCCAACTTCCACCAGACTTGGGGCAGATCTGGAAAAATCTATTAAGAAGAGGGCACGCAAAAACAAGAACACTCACAATCACAATAAGGGACCTAATGGTAATGCACAACCATCTCCTACAAATGTGGCAACTTCCTACAAAGATACACGACCGGCTTGTTCAGAAATGACAGACAATTTGGCTATGCACTCTGGCTCCTTCATATCACTATTGAATTCATTCCATAACGCTGAACAATTGTGTATGTATATCTAG 2079 0.4406 MAEGAEEFVQQTNSPSEIVASQSISENIENYTSSDEVINQAIGDEEVDPEVGMCFGTLEDARAYYYRYAARTGFVVKIRTTGWETINDQRVVVNQALHCNRDGYRTSRVKAPQRRKTVASTNCKARCYLALDKMTGQWRISRVEVSHSHPLNPKLSGMFSANRQLSMHVKDLIQQNDQAGIRPSKTYQALANAVGGPANLTFTEKDVRNYISRHLRISGDETDPKELLKHFSRMKELNPNFFFEIDVDENHSIRNVFWADARCRAAWEYFGDVVTFDTTYKTNRYDVPFGSFVGVNHHGMSTLLGCALLRNEDTHMFADRHMWVPVFFKDEFWAGMRSTQRSESMHSVFDKYLNSKSSLLQFVRQYQNCVIDKEQKELECDAADLRGIIPCVSSSPIEKQFQREYTNSMFRDVQDQFIKKADCDISLINHHGTSIVCEVDQQKMVFDMSVYSRYQVVYCSQSSDVQCDCFMFQSNGILCCHSLAVLLHFRVTSVSSQYILSRWSKNVSRRHTYIRSSIDMDRSDESMTIFRQLCSDFYNIAQDFVATPEVAAILRGAMDSAREKLREHKEFEHQAAHVPSAIYSHTHDECPVSMDELHGPRRVPTRGRPTSTRLGADLEKSIKKRARKNKNTHNHNKGPNGNAQPSPTNVATSYKDTRPACSEMTDNLAMHSGSFISLLNSFHNAEQLCMYI 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02538 692 ProSiteProfiles Zinc finger SWIM-type profile. 454 490 IPR007527 GO:0008270
Arst5g02538 692 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 314 564 IPR031052 GO:0006355
Arst5g02538 692 Pfam SWIM zinc finger 461 488 IPR007527 GO:0008270
Arst5g02538 692 Pfam FAR1 DNA-binding domain 64 153 IPR004330 -
Arst5g02538 692 Pfam MULE transposase domain 273 318 IPR018289 -
Arst5g02538 692 SMART 26again6 465 492 IPR006564 GO:0008270
Arst5g02538 692 MobiDBLite consensus disorder prediction 635 654 - -
Arst5g02538 692 MobiDBLite consensus disorder prediction 594 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02538 Arst-Chr5 73337837 73341311 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst5g02538 FAR1 8.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02538 - - adu:107493576 1275