Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02504 ATGAACCAGCAGGACGAGAAAGCCACCATGGATCTTGTTCCACCCTCTGAGCACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGGATACCATGCAAGAGGCTGCTGGATACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCGTTTCTGAGCACCAGGCCCCCTCCACCTCCAGCCCCTTTCTCTCACACCCATCAAACCACCACCATTGATCACACTCTCACTCTCCAGGGTTTCTACGGTGATTCGAAGAAGGGGCAAGGATCATCTTCATCGTCCTCACCAACTACATCAAACGAATCAGTCTCCCCTAAAGCAGCACCTTTTGTTGTCAAACCACCTGAGAAGAAGCACCGTCTTCCATCTGCATACAACCGTTTCATGAAAGAGGAGATTCAGCGCATCAAAGCAGCCAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCCAAAAATTGGGCAAGGTTCATTCCAAATTCGCCTACAAGCTCAGTTGCTGCAAGTAAAAACAATGAATGA 546 0.5018 MNQQDEKATMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPPPAPFSHTHQTTTIDHTLTLQGFYGDSKKGQGSSSSSSPTTSNESVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPTSSVAASKNNE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02504 181 MobiDBLite consensus disorder prediction 85 111 - -
Arst5g02504 181 FunFam Protein CRABS CLAW 98 169 - -
Arst5g02504 181 SUPERFAMILY HMG-box 110 163 IPR036910 -
Arst5g02504 181 CDD HMG-box_SF 126 162 - -
Arst5g02504 181 Gene3D High mobility group box domain 104 169 IPR036910 -
Arst5g02504 181 MobiDBLite consensus disorder prediction 85 124 - -
Arst5g02504 181 PANTHER PROTEIN YABBY 6-RELATED 15 173 IPR006780 GO:0007275
Arst5g02504 181 Pfam YABBY protein 15 165 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02504 Arst-Chr5 68874814 68876827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02504 5 179 C2C2-YABBY Transcription Factor Family AT1G69180 61.798 8.04e-65 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Arst5g02504 YABBY 1.3e-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02504 K25796 - gmx:100819079 275.018